RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 LNX1Q8TBB1 728 aaPredicted RBP20.87■□□□□ 0.93
GMDS-201ENST00000380805 TMEM8AQ9HCN3 771 aa20.87■□□□□ 0.93
GMDS-201ENST00000380805 PDE2AO00408 941 aaPredicted RBP20.86■□□□□ 0.93
GMDS-201ENST00000380805 BUB1O43683 1085 aa20.86■□□□□ 0.93
GMDS-201ENST00000380805 SORBS3O60504 671 aa20.86■□□□□ 0.93
GMDS-201ENST00000380805 LGR5O75473 907 aa20.86■□□□□ 0.93
GMDS-201ENST00000380805 PNMA6AP0CW24 399 aaPredicted RBP20.86■□□□□ 0.93
GMDS-201ENST00000380805 CYP24A1Q07973 514 aa20.86■□□□□ 0.93
GMDS-201ENST00000380805 KRT39Q6A163 491 aa20.86■□□□□ 0.93
GMDS-201ENST00000380805 WDR93Q6P2C0 686 aa20.86■□□□□ 0.93
GMDS-201ENST00000380805 SLC7A3Q8WY07 619 aa20.86■□□□□ 0.93
GMDS-201ENST00000380805 FAM167AQ96KS9 214 aa20.86■□□□□ 0.93
GMDS-201ENST00000380805 KIAA1586Q9HCI6 787 aa20.86■□□□□ 0.93
GMDS-201ENST00000380805 NRBP2Q9NSY0 501 aa20.86■□□□□ 0.93
GMDS-201ENST00000380805 PLXNA1Q9UIW2 1896 aa20.86■□□□□ 0.93
GMDS-201ENST00000380805 GOLGA8IPA6NC78 632 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 GOLGA8JA6NMD2 632 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 LRRIQ3A6PVS8 624 aaPredicted RBP20.85■□□□□ 0.93
GMDS-201ENST00000380805 HNRNPDLO14979 420 aaKnown RBP20.85■□□□□ 0.93
GMDS-201ENST00000380805 PALMO75781 387 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 GGPS1O95749 300 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 GLRA2P23416 452 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 GPC3P51654 580 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 STAT5BP51692 787 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 FKBP1BP68106 108 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 CLDN10P78369 228 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 KCTD2Q14681 263 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 IFI16Q16666 785 aaKnown RBP20.85■□□□□ 0.93
GMDS-201ENST00000380805 ASAP3Q8TDY4 903 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 POMGNT1Q8WZA1 660 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 SAAL1Q96ER3 474 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 PNKPQ96T60 521 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 MMP19Q99542 508 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 RNF14Q9UBS8 474 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 SLC45A1Q9Y2W3 748 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 PLXNB2O15031 1838 aa20.85■□□□□ 0.93
GMDS-201ENST00000380805 TARSL2A2RTX5 802 aaKnown RBP20.84■□□□□ 0.93
GMDS-201ENST00000380805 GRID2IPA4D2P6 1211 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 TMEM88BA6NKF7 163 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 ZNF185O15231 689 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 H2AFZP0C0S5 128 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 ERVK-9P63128 1117 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 MEI1Q5TIA1 1274 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 H2AFVQ71UI9 128 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 SAPCD2Q86UD0 394 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 ARHGEF19Q8IW93 802 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 PNMA3Q9UL41 463 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 NCANO14594 1321 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 CES2O00748 559 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 MAFO75444 373 aaPredicted RBP20.84■□□□□ 0.93
GMDS-201ENST00000380805 ARIH2O95376 493 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 TCF7P36402 384 aaPredicted RBP20.84■□□□□ 0.93
GMDS-201ENST00000380805 HUNKP57058 714 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 CELF3Q5SZQ8 465 aaKnown RBP20.84■□□□□ 0.93
GMDS-201ENST00000380805 CCDC62Q6P9F0 684 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 LRRC57Q8N9N7 239 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 COG1Q8WTW3 980 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 GPR20Q99678 358 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 TMEM134Q9H6X4 195 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 ARFGAP3Q9NP61 516 aa20.84■□□□□ 0.93
GMDS-201ENST00000380805 FOXN3O00409 490 aaPredicted RBP20.83■□□□□ 0.92
GMDS-201ENST00000380805 GAS2O43903 313 aaKnown RBP20.83■□□□□ 0.92
GMDS-201ENST00000380805 EXTL3O43909 919 aa20.83■□□□□ 0.92
GMDS-201ENST00000380805 PGK2P07205 417 aa20.83■□□□□ 0.92
GMDS-201ENST00000380805 APLP1P51693 650 aa20.83■□□□□ 0.92
GMDS-201ENST00000380805 NFRKBQ6P4R8 1299 aa20.83■□□□□ 0.92
GMDS-201ENST00000380805 C15orf39Q6ZRI6 1047 aa20.83■□□□□ 0.92
GMDS-201ENST00000380805 PLPPR4Q7Z2D5 763 aa20.83■□□□□ 0.92
GMDS-201ENST00000380805 MMGT1Q8N4V1 131 aa20.83■□□□□ 0.92
GMDS-201ENST00000380805 CAPZA3Q96KX2 299 aa20.83■□□□□ 0.92
GMDS-201ENST00000380805 UBE2TQ9NPD8 197 aaPredicted RBP20.83■□□□□ 0.92
GMDS-201ENST00000380805 TMEM253P0C7T8 217 aa20.82■□□□□ 0.92
GMDS-201ENST00000380805 LY6KQ17RY6 165 aa20.82■□□□□ 0.92
GMDS-201ENST00000380805 SLFN11Q7Z7L1 901 aa20.82■□□□□ 0.92
GMDS-201ENST00000380805 BBXQ8WY36 941 aaPredicted RBP20.82■□□□□ 0.92
GMDS-201ENST00000380805 TMEM143Q96AN5 459 aa20.82■□□□□ 0.92
GMDS-201ENST00000380805 TLL2Q9Y6L7 1015 aa20.82■□□□□ 0.92
GMDS-201ENST00000380805 ZC3H11AO75152 810 aaKnown RBP eCLIP20.81■□□□□ 0.92
GMDS-201ENST00000380805 NAP1L1P55209 391 aaKnown RBP20.81■□□□□ 0.92
GMDS-201ENST00000380805 STRN3Q13033 797 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 ARHGAP44Q17R89 818 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 SLFN12LQ6IEE8 588 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 GLYCTKQ8IVS8 523 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 FAM71AQ8IYT1 594 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 FBXL13Q8NEE6 735 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 CAGE1Q8TC20 777 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 PSPC1Q8WXF1 523 aaKnown RBP20.81■□□□□ 0.92
GMDS-201ENST00000380805 SHC3Q92529 594 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 RUBCNQ92622 972 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 SEMA4DQ92854 862 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 IGKV6-21A0A0C4DH24 114 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 ZNF233A6NK53 670 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 NCK2O43639 380 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 LRRN2O75325 713 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 TBC1D8O95759 1140 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 LIG4P49917 911 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 SLC26A2P50443 739 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 HTRA3P83110 453 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 PSMD6Q15008 389 aa20.81■□□□□ 0.92
GMDS-201ENST00000380805 EXOC8Q8IYI6 725 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms