RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 MAML1Q92585 1016 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 RAVER2Q9HCJ3 691 aaKnown RBP13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 GGT7Q9UJ14 662 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 FEM1BQ9UK73 627 aa13.57□□□□□ -0.24
DNMT3A-204ENST00000380756 PRPSAP2O60256 369 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 CDH16O75309 829 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 KCNJ1P48048 391 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 OR6B2Q6IFH4 312 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 LDHDQ86WU2 507 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 SLC30A5Q8TAD4 765 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 ECT2Q9H8V3 914 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 KRT37O76014 449 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 SRGAP2CP0DJJ0 459 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 COMTP21964 271 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 PDZD4Q76G19 769 aaPredicted RBP13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 TRMT10CQ7L0Y3 403 aaKnown RBP13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 TTC13Q8NBP0 860 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 ATP6V0A4Q9HBG4 840 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 IFT122Q9HBG6 1241 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 DCTN4Q9UJW0 460 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 DBR1Q9UK59 544 aaKnown RBP13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 ECE2O60344 883 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 CRCPO75575 148 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 ZBED1O96006 694 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 HNRNPH1P31943 449 aaKnown RBP13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 SFNP31947 248 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 GARSP41250 739 aaKnown RBP13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 SLC29A2Q14542 456 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 SURF1Q15526 300 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 SPATA21Q7Z572 469 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 MIPOL1Q8TD10 442 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 GRAMD1AQ96CP6 724 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 TLR10Q9BXR5 811 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 NUF2Q9BZD4 464 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 HSPBP1Q9NZL4 362 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 SCOCQ9UIL1 159 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 GYG2O15488 501 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 CALB1P05937 261 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 SAT1P21673 171 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 PON1P27169 355 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 CDC42EP5Q6NZY7 148 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 PRPF38AQ8NAV1 312 aaKnown RBP13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 CCT6BQ92526 530 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 NGRNQ9NPE2 291 aaKnown RBP13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 ARL2BPQ9Y2Y0 163 aa13.56□□□□□ -0.24
DNMT3A-204ENST00000380756 SYNJ2BP-COX16A0A087WUM0 186 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 GMNNO75496 209 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 GNA15P30679 374 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 COPB2P35606 906 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 MKRN3Q13064 507 aaKnown RBP13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 STAT4Q14765 748 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 LONRF1Q17RB8 773 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 THNSL1Q8IYQ7 743 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 C9orf72Q96LT7 481 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 DDX23Q9BUQ8 820 aaKnown RBP13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 COX16Q9P0S2 106 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 HERC5Q9UII4 1024 aaKnown RBP13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 GIPC1O14908 333 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 EIF3DO15371 548 aaKnown RBP eCLIP13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 TOM1L1O75674 476 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 ZBED8Q8IZ13 594 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 CAVIN3Q969G5 261 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 NCAPGQ9BPX3 1015 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 IL17RBQ9NRM6 502 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 GABBR1Q9UBS5 961 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 TPX2Q9ULW0 747 aaKnown RBP13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 USP15Q9Y4E8 981 aaPredicted RBP13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 SMIM22K7EJ46 135 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 MYBL1P10243 752 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 PPP2R5CQ13362 524 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 TRIM72Q6ZMU5 477 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 MDM1Q8TC05 714 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 ZFP69BQ9UJL9 534 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 PRR12Q9ULL5 1215 aa13.55□□□□□ -0.24
DNMT3A-204ENST00000380756 ZSCAN5CA6NGD5 496 aaPredicted RBP13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 MED24O75448 989 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 ITIH2P19823 946 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 TMPRSS15P98073 1019 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 PDIA2Q13087 525 aaKnown RBP13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 MAP7Q14244 749 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 EEPD1Q7L9B9 569 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 ZNF526Q8TF50 670 aaPredicted RBP13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 SCFD1Q8WVM8 642 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 CFAP36Q96G28 342 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 SCYL1Q96KG9 808 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 TRAIPQ9BWF2 469 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 COPEO14579 308 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 SPAG7O75391 227 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 AARSP49588 968 aaKnown RBP eCLIP13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 DALRD3Q5D0E6 543 aaKnown RBP13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 ZNF667Q5HYK9 610 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 AP1ARQ63HQ0 302 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 CREG2Q8IUH2 290 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 CRAMP1Q96RY5 1269 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 PABPC3Q9H361 631 aaKnown RBP13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 KCND2Q9NZV8 630 aa13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 PPARGC1AQ9UBK2 798 aaKnown RBP13.54□□□□□ -0.24
DNMT3A-204ENST00000380756 RSPH10B2B2RC85 870 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms