RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 DEFB129Q9H1M3 183 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 MTRF1LQ9UGC7 380 aaKnown RBP17.58■□□□□ 0.41
VPS16-203ENST00000380469 PCYOX1Q9UHG3 505 aa17.58■□□□□ 0.41
VPS16-203ENST00000380469 CTNNA2P26232 953 aa17.58■□□□□ 0.4
VPS16-203ENST00000380469 FNTAP49354 379 aa17.58■□□□□ 0.4
VPS16-203ENST00000380469 RARRES1P49788 294 aa17.58■□□□□ 0.4
VPS16-203ENST00000380469 DRP2Q13474 957 aa17.58■□□□□ 0.4
VPS16-203ENST00000380469 BYSLQ13895 437 aaKnown RBP17.58■□□□□ 0.4
VPS16-203ENST00000380469 DLGAP5Q15398 846 aa17.58■□□□□ 0.4
VPS16-203ENST00000380469 C6orf89Q6UWU4 347 aa17.58■□□□□ 0.4
VPS16-203ENST00000380469 PRPF38AQ8NAV1 312 aaKnown RBP17.58■□□□□ 0.4
VPS16-203ENST00000380469 DDX20Q9UHI6 824 aaKnown RBP17.58■□□□□ 0.4
VPS16-203ENST00000380469 CCDC169A6NNP5 214 aa17.57■□□□□ 0.4
VPS16-203ENST00000380469 YDJCA8MPS7 323 aa17.57■□□□□ 0.4
VPS16-203ENST00000380469 TULP1O00294 542 aaPredicted RBP17.57■□□□□ 0.4
VPS16-203ENST00000380469 CAND2O75155 1236 aa17.57■□□□□ 0.4
VPS16-203ENST00000380469 MTA2O94776 668 aa17.57■□□□□ 0.4
VPS16-203ENST00000380469 HNRNPH1P31943 449 aaKnown RBP17.57■□□□□ 0.4
VPS16-203ENST00000380469 MFAP3P55082 362 aa17.57■□□□□ 0.4
VPS16-203ENST00000380469 GTF2BQ00403 316 aa17.57■□□□□ 0.4
VPS16-203ENST00000380469 C1orf220Q5T0J3 134 aa17.57■□□□□ 0.4
VPS16-203ENST00000380469 FAM71AQ8IYT1 594 aa17.57■□□□□ 0.4
VPS16-203ENST00000380469 PRELID2Q8N945 189 aa17.57■□□□□ 0.4
VPS16-203ENST00000380469 AGBL1Q96MI9 1066 aa17.57■□□□□ 0.4
VPS16-203ENST00000380469 RUNDC3BQ96NL0 473 aa17.57■□□□□ 0.4
VPS16-203ENST00000380469 MTUS1Q9ULD2 1270 aa17.57■□□□□ 0.4
VPS16-203ENST00000380469 PMM2O15305 246 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 DHX15O43143 795 aaKnown RBP17.56■□□□□ 0.4
VPS16-203ENST00000380469 ICAM1P05362 532 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 CHRNA5P30532 468 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 CCDC137Q6PK04 289 aaKnown RBP17.56■□□□□ 0.4
VPS16-203ENST00000380469 ZDHHC24Q6UX98 284 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 CROCCP2Q86T23 111 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 MCF2L2Q86YR7 1114 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 PPM1KQ8N3J5 372 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 FBXO25Q8TCJ0 367 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 PCDHB18PQ96TA0 734 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 TIPINQ9BVW5 301 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 TMEM117Q9H0C3 514 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 TAOK3Q9H2K8 898 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 USP20Q9Y2K6 914 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 CHRNB2P17787 502 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 MARCKSL1P49006 195 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 PEX5P50542 639 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 RASA3Q14644 834 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 TKFCQ3LXA3 575 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 CPLX4Q7Z7G2 160 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 NOP9Q86U38 636 aaKnown RBP17.56■□□□□ 0.4
VPS16-203ENST00000380469 SLC17A8Q8NDX2 589 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 EPS8L1Q8TE68 723 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 CENPTQ96BT3 561 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 CABS1Q96KC9 395 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 ST6GALNAC4Q9H4F1 302 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 AGO4Q9HCK5 861 aaKnown RBP17.56■□□□□ 0.4
VPS16-203ENST00000380469 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.56■□□□□ 0.4
VPS16-203ENST00000380469 NOCTQ9UK39 431 aaKnown RBP17.56■□□□□ 0.4
VPS16-203ENST00000380469 RPTORQ8N122 1335 aa17.56■□□□□ 0.4
VPS16-203ENST00000380469 CYP26A1O43174 497 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 SPOPO43791 374 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 LYPLA2O95372 231 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 SHBGP04278 402 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 YWHABP31946 246 aaKnown RBP17.55■□□□□ 0.4
VPS16-203ENST00000380469 CAP2P40123 477 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 RPL21P46778 160 aaKnown RBP17.55■□□□□ 0.4
VPS16-203ENST00000380469 GTF2A1P52655 376 aaPredicted RBP17.55■□□□□ 0.4
VPS16-203ENST00000380469 ACTN3Q08043 901 aaPredicted RBP17.55■□□□□ 0.4
VPS16-203ENST00000380469 RSBN1LQ6PCB5 846 aaPredicted RBP17.55■□□□□ 0.4
VPS16-203ENST00000380469 CACNA2D3Q8IZS8 1091 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 OGFOD1Q8N543 542 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 KAT5Q92993 513 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 PGM2Q96G03 612 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 SEC16BQ96JE7 1060 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 EPB41L4BQ9H329 900 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 VEZTQ9HBM0 779 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 GRHL1Q9NZI5 618 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 CNOT7Q9UIV1 285 aaKnown RBP17.55■□□□□ 0.4
VPS16-203ENST00000380469 EXOC7Q9UPT5 735 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 TRPC6Q9Y210 931 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 GOLGA6L7A0A1B0GV03 622 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 TLDC2A0PJX2 215 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 C5orf60A6NFR6 353 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 SLC16A4O15374 487 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 PTGER2P43116 358 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 PEX3P56589 373 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 MAP2K1Q02750 393 aaPredicted RBP17.55■□□□□ 0.4
VPS16-203ENST00000380469 PLCB4Q15147 1175 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 C6orf118Q5T5N4 469 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 MIGA2Q7L4E1 593 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 CCDC105Q8IYK2 499 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 ZSWIM2Q8NEG5 633 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 ZNF564Q8TBZ8 553 aaPredicted RBP17.55■□□□□ 0.4
VPS16-203ENST00000380469 PLEKHO2Q8TD55 490 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 C7orf43Q8WVR3 580 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 NUP85Q9BW27 656 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 LRRC4CQ9HCJ2 640 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.55■□□□□ 0.41e-9■■■■■ 76.9
VPS16-203ENST00000380469 TBC1D22BQ9NU19 505 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 COL20A1Q9P218 1284 aa17.55■□□□□ 0.4
VPS16-203ENST00000380469 CHORDC1Q9UHD1 332 aaPredicted RBP17.55■□□□□ 0.4
VPS16-203ENST00000380469 PNMA2Q9UL42 364 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms