RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 SMARCAL1Q9NZC9 954 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 DIS3Q9Y2L1 958 aaKnown RBP13.64□□□□□ -0.23
VPS16-202ENST00000380445 COQ4Q9Y3A0 265 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 GOLGA8IPA6NC78 632 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 GOLGA8JA6NMD2 632 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 HNRNPDLO14979 420 aaKnown RBP13.64□□□□□ -0.23
VPS16-202ENST00000380445 AARSP49588 968 aaKnown RBP eCLIP13.64□□□□□ -0.23
VPS16-202ENST00000380445 EMBQ6PCB8 327 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 CBWD2Q8IUF1 395 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 RHOT2Q8IXI1 618 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 SLC35G2Q8TBE7 412 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 AENQ8WTP8 325 aaKnown RBP13.64□□□□□ -0.23
VPS16-202ENST00000380445 DCPSQ96C86 337 aaKnown RBP13.64□□□□□ -0.23
VPS16-202ENST00000380445 MFSD14AQ96MC6 490 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 ZNF302Q9NR11 478 aa13.64□□□□□ -0.23
VPS16-202ENST00000380445 ADARB2Q9NS39 739 aaKnown RBP13.64□□□□□ -0.23
VPS16-202ENST00000380445 WDR81Q562E7 1941 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 DICER1Q9UPY3 1922 aaKnown RBP13.63□□□□□ -0.23
VPS16-202ENST00000380445 KIAA0391O15091 583 aaKnown RBP13.63□□□□□ -0.23
VPS16-202ENST00000380445 ATG7O95352 703 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 ADRB2P07550 413 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 POLGP54098 1239 aaPredicted RBP13.63□□□□□ -0.23
VPS16-202ENST00000380445 RIOX2Q8IUF8 465 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 ARHGEF19Q8IW93 802 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 SULF1Q8IWU6 871 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 C10orf67Q8IYJ2 551 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 GPD1LQ8N335 351 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 PLEKHO2Q8TD55 490 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 HDAC7Q8WUI4 952 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 BSNDQ8WZ55 320 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 EXOC4Q96A65 974 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 BICD1Q96G01 975 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 FAM81BQ96LP2 452 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 KIFC3Q9BVG8 833 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 ADAM21Q9UKJ8 722 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 HPCAL4Q9UM19 191 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 MAFBQ9Y5Q3 323 aaPredicted RBP13.63□□□□□ -0.23
VPS16-202ENST00000380445 PGRMC1O00264 195 aaKnown RBP13.63□□□□□ -0.23
VPS16-202ENST00000380445 SLC7A5Q01650 507 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 NT5DC3Q86UY8 548 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 FBXL13Q8NEE6 735 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 OLIG1Q8TAK6 271 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 CCDC127Q96BQ5 260 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 SAAL1Q96ER3 474 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 POLR3FQ9H1D9 316 aaPredicted RBP13.63□□□□□ -0.23
VPS16-202ENST00000380445 XPNPEP1Q9NQW7 623 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 ARHGAP28Q9P2N2 729 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 TMEM59LQ9UK28 342 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 STXBP5LQ9Y2K9 1186 aa13.63□□□□□ -0.23
VPS16-202ENST00000380445 LOC285556D6RIA3 1793 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 CEP104O60308 925 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 MYBL2P10244 700 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 IREB2P48200 963 aaKnown RBP13.62□□□□□ -0.23
VPS16-202ENST00000380445 ALDH5A1P51649 535 aaPredicted RBP13.62□□□□□ -0.23
VPS16-202ENST00000380445 GPC3P51654 580 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 MAP2K1Q02750 393 aaPredicted RBP13.62□□□□□ -0.23
VPS16-202ENST00000380445 STRN3Q13033 797 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 MTERF2Q49AM1 385 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 ICE2Q659A1 982 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 CYFIP1Q7L576 1253 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 PPM1KQ8N3J5 372 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 ZSWIM2Q8NEG5 633 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 KCNN1Q92952 543 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.62□□□□□ -0.231e-6■■□□□ 12.7
VPS16-202ENST00000380445 VPS18Q9P253 973 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 ARID2Q68CP9 1835 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 CCDC188H7C350 402 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 OATP04181 439 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 GZMAP12544 262 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 ABCB4P21439 1286 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 HADHBP55084 474 aaKnown RBP13.62□□□□□ -0.23
VPS16-202ENST00000380445 CYP24A1Q07973 514 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 CLUL1Q15846 466 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 DNAAF5Q86Y56 855 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 FAM71AQ8IYT1 594 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 PROCA1Q8NCQ7 364 aaPredicted RBP13.62□□□□□ -0.23
VPS16-202ENST00000380445 HES6Q96HZ4 224 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 NT5C1BQ96P26 610 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 KRT12Q99456 494 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 MPHOSPH6Q99547 160 aaKnown RBP13.62□□□□□ -0.23
VPS16-202ENST00000380445 ISCUQ9H1K1 167 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 PSD3Q9NYI0 1048 aa13.62□□□□□ -0.23
VPS16-202ENST00000380445 WDR90Q96KV7 1748 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 ZNF233A6NK53 670 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 MYO1CO00159 1063 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 USP8P40818 1118 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 SP2Q02086 613 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 PPATQ06203 517 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 NNTQ13423 1086 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 EMC2Q15006 297 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 ENOSF1Q7L5Y1 443 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 METTL13Q8N6R0 699 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.61□□□□□ -0.23
VPS16-202ENST00000380445 GDF3Q9NR23 364 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 RAB20Q9NX57 234 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 ZC3H11AO75152 810 aaKnown RBP eCLIP13.61□□□□□ -0.23
VPS16-202ENST00000380445 RTN2O75298 545 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 CLSTN1O94985 981 aa13.61□□□□□ -0.23
VPS16-202ENST00000380445 HEXIM1O94992 359 aaKnown RBP13.61□□□□□ -0.23
VPS16-202ENST00000380445 TGFB3P10600 412 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms