RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 INO80B-WBP1J3KQ70 363 aa25.75■■□□□ 1.71
U2AF1-202ENST00000380276 ZBTB39O15060 712 aa25.75■■□□□ 1.71
U2AF1-202ENST00000380276 TBX3O15119 743 aa25.75■■□□□ 1.71
U2AF1-202ENST00000380276 EPB41L2O43491 1005 aaKnown RBP25.75■■□□□ 1.71
U2AF1-202ENST00000380276 NCBP1Q09161 790 aaKnown RBP25.75■■□□□ 1.71
U2AF1-202ENST00000380276 HERC2P3Q9BVR0 1158 aa25.75■■□□□ 1.71
U2AF1-202ENST00000380276 EIF2AQ9BY44 585 aaKnown RBP25.75■■□□□ 1.71
U2AF1-202ENST00000380276 TRIM6Q9C030 488 aaPredicted RBP25.75■■□□□ 1.71
U2AF1-202ENST00000380276 MAN1C1Q9NR34 630 aa25.75■■□□□ 1.71
U2AF1-202ENST00000380276 FBXL21Q9UKT6 434 aa25.75■■□□□ 1.71
U2AF1-202ENST00000380276 IPPQ9Y573 584 aa25.75■■□□□ 1.71
U2AF1-202ENST00000380276 ARID2Q68CP9 1835 aa25.74■■□□□ 1.71
U2AF1-202ENST00000380276 SOD2P04179 222 aa25.74■■□□□ 1.71
U2AF1-202ENST00000380276 MLH1P40692 756 aa25.74■■□□□ 1.71
U2AF1-202ENST00000380276 SLFN12Q8IYM2 578 aa25.74■■□□□ 1.71
U2AF1-202ENST00000380276 SMG8Q8ND04 991 aaKnown RBP25.74■■□□□ 1.71
U2AF1-202ENST00000380276 GAD1Q99259 594 aa25.74■■□□□ 1.71
U2AF1-202ENST00000380276 SSX2IPQ9Y2D8 614 aa25.74■■□□□ 1.71
U2AF1-202ENST00000380276 HES2Q9Y543 173 aa25.74■■□□□ 1.71
U2AF1-202ENST00000380276 STK36Q9NRP7 1315 aa25.73■■□□□ 1.71
U2AF1-202ENST00000380276 TSPAN1O60635 241 aa25.73■■□□□ 1.71
U2AF1-202ENST00000380276 ADH1AP07327 375 aa25.73■■□□□ 1.71
U2AF1-202ENST00000380276 TDGQ13569 410 aa25.73■■□□□ 1.71
U2AF1-202ENST00000380276 TFDP1Q14186 410 aa25.73■■□□□ 1.71
U2AF1-202ENST00000380276 NOTUMQ6P988 496 aa25.73■■□□□ 1.71
U2AF1-202ENST00000380276 ELMSAN1Q6PJG2 1045 aa25.73■■□□□ 1.71
U2AF1-202ENST00000380276 MARCH5Q9NX47 278 aa25.73■■□□□ 1.71
U2AF1-202ENST00000380276 FAM205CA6NFA0 338 aa25.72■■□□□ 1.71
U2AF1-202ENST00000380276 NR1I2O75469 434 aa25.72■■□□□ 1.71
U2AF1-202ENST00000380276 AXLP30530 894 aa25.72■■□□□ 1.71
U2AF1-202ENST00000380276 GBP2P32456 591 aaPredicted RBP25.72■■□□□ 1.71
U2AF1-202ENST00000380276 GLUD2P49448 558 aa25.72■■□□□ 1.71
U2AF1-202ENST00000380276 SCNN1GP51170 649 aa25.72■■□□□ 1.71
U2AF1-202ENST00000380276 MXD4Q14582 209 aaPredicted RBP25.72■■□□□ 1.71
U2AF1-202ENST00000380276 EARS2Q5JPH6 523 aaKnown RBP25.72■■□□□ 1.71
U2AF1-202ENST00000380276 TAS1R1Q7RTX1 841 aa25.72■■□□□ 1.71
U2AF1-202ENST00000380276 RPS6KC1Q96S38 1066 aa25.72■■□□□ 1.71
U2AF1-202ENST00000380276 RNF39Q9H2S5 420 aa25.72■■□□□ 1.71
U2AF1-202ENST00000380276 BRMS1Q9HCU9 246 aa25.72■■□□□ 1.71
U2AF1-202ENST00000380276 ORC3Q9UBD5 711 aaPredicted RBP25.72■■□□□ 1.71
U2AF1-202ENST00000380276 C2orf16Q68DN1 1984 aa25.71■■□□□ 1.71
U2AF1-202ENST00000380276 CCDC195A0A1B0GUA6 201 aa25.71■■□□□ 1.71
U2AF1-202ENST00000380276 ARL5CA6NH57 179 aa25.71■■□□□ 1.71
U2AF1-202ENST00000380276 LILRB3O75022 631 aa25.71■■□□□ 1.71
U2AF1-202ENST00000380276 GLUD1P00367 558 aa25.71■■□□□ 1.71
U2AF1-202ENST00000380276 KRT2P35908 639 aa25.71■■□□□ 1.71
U2AF1-202ENST00000380276 C15orf39Q6ZRI6 1047 aa25.71■■□□□ 1.71
U2AF1-202ENST00000380276 COLGALT2Q8IYK4 626 aa25.71■■□□□ 1.71
U2AF1-202ENST00000380276 HACE1Q8IYU2 909 aa25.71■■□□□ 1.71
U2AF1-202ENST00000380276 WASF1Q92558 559 aa25.71■■□□□ 1.71
U2AF1-202ENST00000380276 STK25O00506 426 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 INPPL1O15357 1258 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 TEX28O15482 410 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 RFX1P22670 979 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 CLCN5P51795 746 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 PTENP60484 403 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 NR5A1Q13285 461 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 CCDC51Q96ER9 411 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 ZFP42Q96MM3 310 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 EIF2AK1Q9BQI3 630 aaKnown RBP25.7■■□□□ 1.7
U2AF1-202ENST00000380276 CSRNP2Q9H175 543 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 KCNK12Q9HB15 430 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 XPNPEP1Q9NQW7 623 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 DPP7Q9UHL4 492 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 TPCN1Q9ULQ1 816 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 PLXNA3P51805 1871 aa25.7■■□□□ 1.7
U2AF1-202ENST00000380276 PFKFB2O60825 505 aa25.69■■□□□ 1.7
U2AF1-202ENST00000380276 SPATA31D3P0C874 917 aa25.69■■□□□ 1.7
U2AF1-202ENST00000380276 FOSBP53539 338 aa25.69■■□□□ 1.7
U2AF1-202ENST00000380276 CWF19L1Q69YN2 538 aaKnown RBP25.69■■□□□ 1.7
U2AF1-202ENST00000380276 SPATA31D4Q6ZUB0 917 aa25.69■■□□□ 1.7
U2AF1-202ENST00000380276 GLYCTKQ8IVS8 523 aa25.69■■□□□ 1.7
U2AF1-202ENST00000380276 ASAP3Q8TDY4 903 aa25.69■■□□□ 1.7
U2AF1-202ENST00000380276 COLEC11Q9BWP8 271 aa25.69■■□□□ 1.7
U2AF1-202ENST00000380276 NXF3Q9H4D5 531 aaKnown RBP25.69■■□□□ 1.7
U2AF1-202ENST00000380276 PIDD1Q9HB75 910 aa25.69■■□□□ 1.7
U2AF1-202ENST00000380276 MIOSQ9NXC5 875 aa25.69■■□□□ 1.7
U2AF1-202ENST00000380276 DUSP12Q9UNI6 340 aa25.69■■□□□ 1.7
U2AF1-202ENST00000380276 F8W810 466 aa25.68■■□□□ 1.7
U2AF1-202ENST00000380276 SLITRK3O94933 977 aa25.68■■□□□ 1.7
U2AF1-202ENST00000380276 SPIRE1Q08AE8 756 aa25.68■■□□□ 1.7
U2AF1-202ENST00000380276 CAPSQ13938 189 aa25.68■■□□□ 1.7
U2AF1-202ENST00000380276 PCBP1Q15365 356 aaKnown RBP eCLIP25.68■■□□□ 1.7
U2AF1-202ENST00000380276 CALCRLQ16602 461 aa25.68■■□□□ 1.7
U2AF1-202ENST00000380276 ASCL5Q7RTU5 278 aa25.68■■□□□ 1.7
U2AF1-202ENST00000380276 CDR2LQ86X02 465 aaPredicted RBP25.68■■□□□ 1.7
U2AF1-202ENST00000380276 PALB2Q86YC2 1186 aa25.68■■□□□ 1.7
U2AF1-202ENST00000380276 SIX5Q8N196 739 aa25.68■■□□□ 1.7
U2AF1-202ENST00000380276 STAMQ92783 540 aa25.68■■□□□ 1.7
U2AF1-202ENST00000380276 PCDHA12Q9UN75 941 aa25.68■■□□□ 1.7
U2AF1-202ENST00000380276 TDRD15B5MCY1 1934 aaKnown RBP25.68■■□□□ 1.7
U2AF1-202ENST00000380276 CLUHO75153 1309 aa25.67■■□□□ 1.7
U2AF1-202ENST00000380276 RFPL2O75678 378 aa25.67■■□□□ 1.7
U2AF1-202ENST00000380276 NPTXRO95502 500 aa25.67■■□□□ 1.7
U2AF1-202ENST00000380276 AKAP5P24588 427 aa25.67■■□□□ 1.7
U2AF1-202ENST00000380276 MBTD1Q05BQ5 628 aa25.67■■□□□ 1.7
U2AF1-202ENST00000380276 CMASQ8NFW8 434 aaPredicted RBP25.67■■□□□ 1.7
U2AF1-202ENST00000380276 SMG7Q92540 1137 aaKnown RBP25.67■■□□□ 1.7
U2AF1-202ENST00000380276 B3GALT6Q96L58 329 aa25.67■■□□□ 1.7
U2AF1-202ENST00000380276 IGSF9Q9P2J2 1179 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms