RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 MAP2K1Q02750 393 aaPredicted RBP21.54■■□□□ 1.04
PDLIM5-205ENST00000380180 MKRN4PQ13434 485 aaPredicted RBP21.54■■□□□ 1.04
PDLIM5-205ENST00000380180 ARHGAP44Q17R89 818 aa21.54■■□□□ 1.04
PDLIM5-205ENST00000380180 IER5Q5VY09 327 aa21.54■■□□□ 1.04
PDLIM5-205ENST00000380180 TMEM134Q9H6X4 195 aa21.54■■□□□ 1.04
PDLIM5-205ENST00000380180 KAT6AQ92794 2004 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 EFCAB8A8MWE9 144 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 ADCY3O60266 1144 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 MOCS3O95396 460 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 SNAI1O95863 264 aaPredicted RBP21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 PIGRP01833 764 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 ATP1A1P05023 1023 aaKnown RBP21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 RFX1P22670 979 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 LAMC2Q13753 1193 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 GRB14Q14449 540 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 KATNBL1Q9H079 304 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 UBE2TQ9NPD8 197 aaPredicted RBP21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 TRPC6Q9Y210 931 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 CAPN6Q9Y6Q1 641 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 IGKV6-21A0A0C4DH24 114 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 RBM47A0AV96 593 aaKnown RBP21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 ZNF233A6NK53 670 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 EXTL3O43909 919 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 KRT39Q6A163 491 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 PLEKHH3Q7Z736 793 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 ARHGEF19Q8IW93 802 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 EXOC8Q8IYI6 725 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 LRRC71Q8N4P6 559 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 TRIM58Q8NG06 486 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 TCP11Q8WWU5 503 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 ZBTB45Q96K62 511 aaPredicted RBP21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 TARS2Q9BW92 718 aaKnown RBP21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 HAPLN2Q9GZV7 340 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 HDAC6Q9UBN7 1215 aa21.53■■□□□ 1.04
PDLIM5-205ENST00000380180 TACC1O75410 805 aa21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 GH1P01241 217 aa21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 TFRCP02786 760 aaKnown RBP21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 EDN1P05305 212 aa21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 ADCYAP1R1P41586 468 aa21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 USP37Q86T82 979 aa21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 TRAPPC12Q8WVT3 735 aa21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 PSPC1Q8WXF1 523 aaKnown RBP21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 UBXN4Q92575 508 aa21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 MAML3Q96JK9 1138 aa21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 RNPEPQ9H4A4 650 aa21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 KIAA1586Q9HCI6 787 aa21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 TMEM8AQ9HCN3 771 aa21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 TOPORSQ9NS56 1045 aaPredicted RBP21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 NAGPAQ9UK23 515 aa21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 AGO2Q9UKV8 859 aaKnown RBP21.52■■□□□ 1.04
PDLIM5-205ENST00000380180 FOXN3O00409 490 aaPredicted RBP21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 GAS2O43903 313 aaKnown RBP21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 HBP1O60381 514 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 DLATP10515 647 aaKnown RBP21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 MAPK4P31152 587 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 LAMTOR4Q0VGL1 99 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 KIAA0753Q2KHM9 967 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 C10orf76Q5T2E6 689 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 PAPD7Q5XG87 772 aaKnown RBP21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 SLFN12LQ6IEE8 588 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 TRAPPC11Q7Z392 1133 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 SEMA4DQ92854 862 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 PACSIN1Q9BY11 444 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 ERAP1Q9NZ08 941 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 SRGAP2CP0DJJ0 459 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 ANXA13P27216 316 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 MXD4Q14582 209 aaPredicted RBP21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 NAB2Q15742 525 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 VPS36Q86VN1 386 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 RNF10Q8N5U6 811 aaKnown RBP21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 COQ4Q9Y3A0 265 aa21.51■■□□□ 1.03
PDLIM5-205ENST00000380180 ANO9A1A5B4 782 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 KIAA0391O15091 583 aaKnown RBP21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 KLRC1P26715 233 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 GTF2H1P32780 548 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 ACOT2P49753 483 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 ENPEPQ07075 957 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 ALKBH5Q6P6C2 394 aaKnown RBP21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 SRGAP1Q7Z6B7 1085 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 FMNL3Q8IVF7 1028 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 CEP112Q8N8E3 955 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.5■■□□□ 1.032e-6■■■■■ 86.5
PDLIM5-205ENST00000380180 PUF60Q9UHX1 559 aaKnown RBP21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 CPA4Q9UI42 421 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 SAR1BQ9Y6B6 198 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 DDX3XO00571 662 aaKnown RBP eCLIP21.5■■□□□ 1.038e-10■■■□□ 15.6
PDLIM5-205ENST00000380180 BUB1O43683 1085 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 LGALS2P05162 132 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 CCDC172P0C7W6 258 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 ZNF157P51786 506 aaPredicted RBP21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 NLRP11P59045 1033 aaKnown RBP21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 BMS1Q14692 1282 aaKnown RBP21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 CHADLQ6NUI6 762 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 SV2AQ7L0J3 742 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 PPTC7Q8NI37 304 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 NPLOC4Q8TAT6 608 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 NENFQ9UMX5 172 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 JRKLQ9Y4A0 524 aa21.5■■□□□ 1.03
PDLIM5-205ENST00000380180 EFNA5P52803 228 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms