RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 STAT1P42224 750 aa7.8□□□□□ -1.16
TRIM6-202ENST00000380097 MGAT5Q09328 741 aa7.8□□□□□ -1.16
TRIM6-202ENST00000380097 TRAPPC3LQ5T215 181 aa7.8□□□□□ -1.16
TRIM6-202ENST00000380097 C6orf163Q5TEZ5 329 aa7.8□□□□□ -1.16
TRIM6-202ENST00000380097 SPTY2D1Q68D10 685 aaPredicted RBP7.8□□□□□ -1.16
TRIM6-202ENST00000380097 NME8Q8N427 588 aa7.8□□□□□ -1.16
TRIM6-202ENST00000380097 ARHGEF1Q92888 912 aaKnown RBP7.8□□□□□ -1.16
TRIM6-202ENST00000380097 CEP63Q96MT8 703 aa7.8□□□□□ -1.16
TRIM6-202ENST00000380097 CDC42EP4Q9H3Q1 356 aaKnown RBP7.8□□□□□ -1.16
TRIM6-202ENST00000380097 ERVK-5Q9HDB9 667 aa7.8□□□□□ -1.16
TRIM6-202ENST00000380097 PPP1R9AQ9ULJ8 1098 aa7.8□□□□□ -1.16
TRIM6-202ENST00000380097 FAM196BA6NMK8 535 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 RASA4BC9J798 803 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 PDLIM1O00151 329 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 RASA4O43374 803 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 PDE8AO60658 829 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 GFPT2O94808 682 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 RXRBP28702 533 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 IL6STP40189 918 aaPredicted RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 YARSP54577 528 aaKnown RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 USP46P62068 366 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 POU5F1Q01860 360 aaKnown RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 OCRLQ01968 901 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 TNIP1Q15025 636 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 TAF1BQ53T94 588 aaPredicted RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 HERC4Q5GLZ8 1057 aaPredicted RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 OLFML2BQ68BL8 750 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 VSTM1Q6UX27 236 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 KRT25Q7Z3Z0 450 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 FAM136AQ96C01 138 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 HAUS1Q96CS2 278 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 IWS1Q96ST2 819 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 ZNF184Q99676 751 aaPredicted RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 PHACTR1Q9C0D0 580 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 SH3GLB2Q9NR46 395 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 LRRC4BQ9NT99 713 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 RPL26L1Q9UNX3 145 aaKnown RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 CHKBQ9Y259 395 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 COMMD3-BMI1R4GMX3 469 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 PFASO15067 1338 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 SPATA31A6Q5VVP1 1343 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 BCL9O00512 1426 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 A0A0A6YYK5 440 aaPredicted RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 USP17L12C9JPN9 530 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 USP17L21D6R901 530 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 HNRNPRO43390 633 aaKnown RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 CCDC22O60826 627 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 ZNF189O75820 626 aaPredicted RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 KRT36O76013 467 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 BAG2O95816 211 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 TTLL1O95922 423 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 TMED1Q13445 227 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 UBAP2Q5T6F2 1119 aaKnown RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 FOXB2Q5VYV0 432 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 GALNT17Q6IS24 598 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 IRF2BP2Q7Z5L9 587 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 NEK8Q86SG6 692 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 GLIS3Q8NEA6 775 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 SH3TC2Q8TF17 1288 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 RFFLQ8WZ73 363 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 SMC6Q96SB8 1091 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 SPATA16Q9BXB7 569 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 OCEL1Q9H607 264 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 HDAC9Q9UKV0 1011 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 TTC7AQ9ULT0 858 aaPredicted RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 SLC4A7Q9Y6M7 1214 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 SYNGAP1Q96PV0 1343 aa7.79□□□□□ -1.16
TRIM6-202ENST00000380097 BAZ2BQ9UIF8 2168 aaKnown RBP7.79□□□□□ -1.16
TRIM6-202ENST00000380097 SMAPO00193 183 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 EYA4O95677 639 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 CSF1RP07333 972 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 FAM163BP0C2L3 166 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 XRCC5P13010 732 aaKnown RBP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 FLT1P17948 1338 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 TAC1P20366 129 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 NR2F2P24468 414 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 NPEPPSP55786 919 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 TMED2Q15363 201 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 Q4G0T1 1027 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 ZCWPW2Q504Y3 356 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 C4orf50Q6ZRC1 276 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 C3orf67Q6ZVT6 689 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 DEFB132Q7Z7B7 95 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 SLFN11Q7Z7L1 901 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 PHLDB2Q86SQ0 1253 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 TRIM59Q8IWR1 403 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 CCDC65Q8IXS2 484 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 ARHGAP24Q8N264 748 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 ISCA1Q9BUE6 129 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 TSPYL2Q9H2G4 693 aaPredicted RBP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 SYNCQ9H7C4 482 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 ANGPTL2Q9UKU9 493 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 STXBP5LQ9Y2K9 1186 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 CFAP69A5D8W1 941 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 FAM47DPA6NHR8 397 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 HNRNPCL1O60812 293 aaKnown RBP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 PENKP01210 267 aaPredicted RBP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 LYNP07948 512 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms