RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SH3GL2Q99962 352 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 ALG6Q9Y672 507 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 CIB2O75838 187 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 NBPF9Q3BBW0 867 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 PADI6Q6TGC4 694 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 LRRC15Q8TF66 581 aa12.19□□□□□ -0.46
SMAD9-202ENST00000379826 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■■■ 56.2
SMAD9-202ENST00000379826 UPF1Q92900 1129 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMAD9-202ENST00000379826 CALR3Q96L12 384 aaKnown RBP12.19□□□□□ -0.46
SMAD9-202ENST00000379826 PRDM5Q9NQX1 630 aaPredicted RBP12.19□□□□□ -0.46
SMAD9-202ENST00000379826 DIAPH2O60879 1101 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 EYA4O95677 639 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 TROVE2P10155 538 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMAD9-202ENST00000379826 CRKP46108 304 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 BFSP1Q12934 665 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 SLC20A1Q8WUM9 679 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 LXNQ9BS40 222 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 TMEM206Q9H813 350 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 HNRNPDLO14979 420 aaKnown RBP12.18□□□□□ -0.46
SMAD9-202ENST00000379826 AGTP01019 485 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 KRT1P04264 644 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.18□□□□□ -0.46
SMAD9-202ENST00000379826 RSAD2Q8WXG1 361 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 ZKSCAN4Q969J2 545 aaPredicted RBP12.18□□□□□ -0.46
SMAD9-202ENST00000379826 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.18□□□□□ -0.46
SMAD9-202ENST00000379826 MYH8P13535 1937 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 IGF2BP3O00425 579 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMAD9-202ENST00000379826 LIG4P49917 911 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 TSPYL2Q9H2G4 693 aaPredicted RBP12.18□□□□□ -0.46
SMAD9-202ENST00000379826 GEMIN8Q9NWZ8 242 aaKnown RBP12.18□□□□□ -0.46
SMAD9-202ENST00000379826 KCNH4Q9UQ05 1017 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.18□□□□□ -0.46
SMAD9-202ENST00000379826 M0QZ92 97 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 FSBPO95073 299 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 TMEM253P0C7T8 217 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 IFI35P80217 286 aaPredicted RBP12.18□□□□□ -0.46
SMAD9-202ENST00000379826 SREBF2Q12772 1141 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 CEP128Q6ZU80 1094 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 SPATA21Q7Z572 469 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 ANKRD35Q8N283 1001 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 ZNF384Q8TF68 577 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 ETNK1Q9HBU6 452 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 PI4KBQ9UBF8 816 aa12.18□□□□□ -0.46
SMAD9-202ENST00000379826 ESYT2A0FGR8 921 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 TMEM120BA0PK00 339 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 KCNA1Q09470 495 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 MIGA2Q7L4E1 593 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 PRPF38AQ8NAV1 312 aaKnown RBP12.17□□□□□ -0.46
SMAD9-202ENST00000379826 SNF8Q96H20 258 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 YIPF3Q9GZM5 350 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 TXLNGQ9NUQ3 528 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 AIPL1Q9NZN9 384 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 CCDC160A6NGH7 325 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 F5H6K3 240 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 KLRC3Q07444 240 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 RNF25Q96BH1 459 aaPredicted RBP12.17□□□□□ -0.46
SMAD9-202ENST00000379826 FAM20AQ96MK3 541 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 YY1AP1Q9H869 796 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 KMT5AQ9NQR1 393 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 SPATA31A1Q5TZJ5 1347 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 FGRP09769 529 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 DESP17661 470 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 NT5C2P49902 561 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 RASSF2P50749 326 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 EPC2Q52LR7 807 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 ANKRD20A3Q5VUR7 823 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 CTAGE3PQ8IX95 158 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.17□□□□□ -0.46
SMAD9-202ENST00000379826 GPR75-ASB3A0A0A6YYF3 556 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 TLR2O60603 784 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 PLCB4Q15147 1175 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 ARHGEF16Q5VV41 709 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 LMBRD2Q68DH5 695 aaPredicted RBP12.17□□□□□ -0.46
SMAD9-202ENST00000379826 FBXO25Q8TCJ0 367 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 CHURC1Q8WUH1 139 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 FAM129AQ9BZQ8 928 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 WNT8AQ9H1J5 351 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 PCDHGC5Q9Y5F6 944 aa12.17□□□□□ -0.46
SMAD9-202ENST00000379826 BBOX1O75936 387 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 HGSNATQ68CP4 663 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 TBC1D16Q8TBP0 767 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 NEUROG2Q9H2A3 272 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 MSH4O15457 936 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 TRAPPC3O43617 180 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 SMIM24O75264 130 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 BAG2O95816 211 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 SLURP2P0DP57 97 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 CHRNA5P30532 468 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 CPA5Q8WXQ8 436 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 P3H4Q92791 437 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 MTIF3Q9H2K0 278 aaKnown RBP12.16□□□□□ -0.46
SMAD9-202ENST00000379826 RIOX1Q9H6W3 641 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 DCDC2CA8MYV0 355 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 FOXN3O00409 490 aaPredicted RBP12.16□□□□□ -0.46
SMAD9-202ENST00000379826 ZBED4O75132 1171 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 ATP6V1G2O95670 118 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 KRT19P08727 400 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 CD19P15391 556 aa12.16□□□□□ -0.46
SMAD9-202ENST00000379826 CA4P22748 312 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms