RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 SBF1O95248 1867 aa16.08■□□□□ 0.17
PRNP-201ENST00000379440 LRRIQ3A6PVS8 624 aaPredicted RBP16.08■□□□□ 0.16
PRNP-201ENST00000379440 ALDH5A1P51649 535 aaPredicted RBP16.08■□□□□ 0.16
PRNP-201ENST00000379440 NCAPG2Q86XI2 1143 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 DNERQ8NFT8 737 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 TPCN2Q8NHX9 752 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 PAGR1Q9BTK6 254 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 POLR3FQ9H1D9 316 aaPredicted RBP16.08■□□□□ 0.16
PRNP-201ENST00000379440 ATP6V0A4Q9HBG4 840 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 PDE11AQ9HCR9 933 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 TOPORSQ9NS56 1045 aaPredicted RBP16.08■□□□□ 0.16
PRNP-201ENST00000379440 H3BQF6 201 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 MAPK13O15264 365 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 N4BP1O75113 896 aaKnown RBP16.08■□□□□ 0.16
PRNP-201ENST00000379440 ABCB4P21439 1286 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 TNFAIP3P21580 790 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 CCNI2Q6ZMN8 369 aaPredicted RBP16.08■□□□□ 0.16
PRNP-201ENST00000379440 TAS1R3Q7RTX0 852 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 SLC20A1Q8WUM9 679 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 POMGNT1Q8WZA1 660 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 SEMA4DQ92854 862 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 OSGEPQ9NPF4 335 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 SYNGAP1Q96PV0 1343 aa16.08■□□□□ 0.16
PRNP-201ENST00000379440 P4HA2O15460 535 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 KIF22Q14807 665 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 XKR3Q5GH77 459 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 EEPD1Q7L9B9 569 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 GOLGA6L1Q8N7Z2 621 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 MCPH1Q8NEM0 835 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 PARD3BQ8TEW8 1205 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 TMEM143Q96AN5 459 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 FAM84AQ96KN4 292 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 C17orf75Q9HAS0 396 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 ZNF302Q9NR11 478 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 IGSF9BQ9UPX0 1349 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 PTPRFP10586 1907 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 SOWAHBA6NEL2 793 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 KCNK3O14649 394 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 HNRNPDLO14979 420 aaKnown RBP16.07■□□□□ 0.16
PRNP-201ENST00000379440 ICAM3P32942 547 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 USP8P40818 1118 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 RPS6KA1Q15418 735 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 RIOX2Q8IUF8 465 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 HVCN1Q96D96 273 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 SPATC1LQ9H0A9 340 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 PLEKHA4Q9H4M7 779 aa16.07■□□□□ 0.16
PRNP-201ENST00000379440 ARID2Q68CP9 1835 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 KIF4AO95239 1232 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 MCM3P25205 808 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 IFI16Q16666 785 aaKnown RBP16.06■□□□□ 0.16
PRNP-201ENST00000379440 UPF1Q92900 1129 aaKnown RBP eCLIP16.06■□□□□ 0.164e-7■■■■□ 24.2
PRNP-201ENST00000379440 ACP6Q9NPH0 428 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 INTUQ9ULD6 942 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 MAFBQ9Y5Q3 323 aaPredicted RBP16.06■□□□□ 0.16
PRNP-201ENST00000379440 ATG7O95352 703 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 RFX1P22670 979 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 POLGP54098 1239 aaPredicted RBP16.06■□□□□ 0.16
PRNP-201ENST00000379440 EMC2Q15006 297 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 CCDC70Q6NSX1 233 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 SLC35G2Q8TBE7 412 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 BICD1Q96G01 975 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 IFT74Q96LB3 600 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 AGPAT1Q99943 283 aa16.06■□□□□ 0.16
PRNP-201ENST00000379440 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.06■□□□□ 0.16
PRNP-201ENST00000379440 UBA1P22314 1058 aaKnown RBP16.05■□□□□ 0.16
PRNP-201ENST00000379440 GYS2P54840 703 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 C10orf67Q8IYJ2 551 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 PPM1KQ8N3J5 372 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 TAF4BQ92750 862 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 ARHGEF26Q96DR7 871 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 SGSM3Q96HU1 749 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 KREMEN1Q96MU8 473 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 MED4Q9NPJ6 270 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 RNF14Q9UBS8 474 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 A0A0A6YYK5 440 aaPredicted RBP16.05■□□□□ 0.16
PRNP-201ENST00000379440 OATP04181 439 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 DLATP10515 647 aaKnown RBP16.05■□□□□ 0.16
PRNP-201ENST00000379440 IREB2P48200 963 aaKnown RBP16.05■□□□□ 0.16
PRNP-201ENST00000379440 KRT39Q6A163 491 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 DAAM2Q86T65 1068 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 FBXL18Q96ME1 805 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 FAM213AQ9BRX8 229 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 THAP2Q9H0W7 228 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 CXorf56Q9H5V9 222 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 ARHGAP28Q9P2N2 729 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 FBXO40Q9UH90 709 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 SUFUQ9UMX1 484 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 MYH9P35579 1960 aaKnown RBP16.05■□□□□ 0.16
PRNP-201ENST00000379440 OTOFQ9HC10 1997 aa16.05■□□□□ 0.16
PRNP-201ENST00000379440 A0A0G2JLL6 359 aaPredicted RBP16.04■□□□□ 0.16
PRNP-201ENST00000379440 GSTTP1A0A1W2PQM5 241 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 SGPL1O95470 568 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 TMEM253P0C7T8 217 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 RTP1P59025 263 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 PEX26Q7Z412 305 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 PRRT2Q7Z6L0 340 aaPredicted RBP16.04■□□□□ 0.16
PRNP-201ENST00000379440 SLFN11Q7Z7L1 901 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 TAS1R2Q8TE23 839 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 MFSD14AQ96MC6 490 aa16.04■□□□□ 0.16
PRNP-201ENST00000379440 PCYT2Q99447 389 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms