RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 HIST1H2ADP20671 130 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 PPARAQ07869 468 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 SCARA3Q6AZY7 606 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 HIST1H2AHQ96KK5 128 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 HIST1H2AJQ99878 128 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 H2AFJQ9BTM1 129 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 LRRIQ3A6PVS8 624 aaPredicted RBP14.04□□□□□ -0.16
HIPK3-202ENST00000379016 CYBBP04839 570 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 PTPN1P18031 435 aaKnown RBP14.04□□□□□ -0.16
HIPK3-202ENST00000379016 VEPH1Q14D04 833 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 SLFN13Q68D06 897 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 MACC1Q6ZN28 852 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 PNKPQ96T60 521 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 ADI1Q9BV57 179 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 OLFML3Q9NRN5 406 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 INTS13Q9NVM9 706 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 FAM135AQ9P2D6 1515 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 BTKQ06187 659 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 TNNI3KQ59H18 835 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 TBC1D9BQ66K14 1250 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 GALNT4Q8N4A0 578 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 ZNF668Q96K58 619 aaPredicted RBP14.04□□□□□ -0.16
HIPK3-202ENST00000379016 UPP2O95045 317 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 PPP4R3CPQ6ZMV5 832 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 M0R3G1 203 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 GDF11O95390 407 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 BRAFP15056 766 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 CDH2P19022 906 aaPredicted RBP14.04□□□□□ -0.16
HIPK3-202ENST00000379016 GTF2E2P29084 291 aaKnown RBP14.04□□□□□ -0.16
HIPK3-202ENST00000379016 GRIK1P39086 918 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 INPP5AQ14642 412 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 LRRC49Q8IUZ0 686 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 DENND6AQ8IWF6 608 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 C18orf25Q96B23 403 aaPredicted RBP14.04□□□□□ -0.16
HIPK3-202ENST00000379016 CLIC6Q96NY7 704 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 PRPF18Q99633 342 aaKnown RBP14.04□□□□□ -0.16
HIPK3-202ENST00000379016 TUFT1Q9NNX1 390 aa14.04□□□□□ -0.16
HIPK3-202ENST00000379016 TCN1P20061 433 aaPredicted RBP14.03□□□□□ -0.16
HIPK3-202ENST00000379016 BAG6P46379 1132 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 APBA1Q02410 837 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 PUDPQ08623 228 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 SYCP2LQ5T4T6 812 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 CAPRIN2Q6IMN6 1127 aaKnown RBP14.03□□□□□ -0.16
HIPK3-202ENST00000379016 ANKRD44Q8N8A2 993 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 RPS6KB2Q9UBS0 482 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 HMBSP08397 361 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 ATAD3BQ5T9A4 648 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 ULK3Q6PHR2 472 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 SLC10A4Q96EP9 437 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 LGR6Q9HBX8 967 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 EPHB4P54760 987 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 TTC23Q5W5X9 447 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 CEP95Q96GE4 821 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 E9PBE3 544 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 HUS1O60921 280 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 CYP7B1O75881 506 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 EIF2B5Q13144 721 aaKnown RBP14.03□□□□□ -0.16
HIPK3-202ENST00000379016 CAMK1Q14012 370 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 ZNF438Q7Z4V0 828 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 MIER2Q8N344 545 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 ZSCAN10Q96SZ4 725 aaPredicted RBP14.03□□□□□ -0.16
HIPK3-202ENST00000379016 EXO5Q9H790 373 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 IMPAD1Q9NX62 359 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 K7ERI5 159 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 SNPHO15079 494 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 SCN3BQ9NY72 215 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 PPP2R3BQ9Y5P8 575 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 PCDH11XQ9BZA7 1347 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 PCDH11YQ9BZA8 1340 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 MOSPD2Q8NHP6 518 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 FANCLQ9NW38 375 aa14.03□□□□□ -0.16
HIPK3-202ENST00000379016 GNAT1P11488 350 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 SLC16A2P36021 539 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 PTGDRQ13258 359 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 SYMPKQ92797 1274 aaKnown RBP14.02□□□□□ -0.16
HIPK3-202ENST00000379016 MUC3BQ9H195 1237 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 DBNDD1Q9H9R9 158 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.02□□□□□ -0.16
HIPK3-202ENST00000379016 SLC25A13Q9UJS0 675 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 PCDHB8Q9UN66 801 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 SH3GLB1Q9Y371 365 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 NESP48681 1621 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 GCP02774 474 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 ZSWIM7Q19AV6 140 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 LATS2Q9NRM7 1088 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 DISP3Q9P2K9 1392 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 SH3TC1Q8TE82 1336 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 NR1D1P20393 614 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 EIF2S3P41091 472 aaKnown RBP14.02□□□□□ -0.16
HIPK3-202ENST00000379016 PLOD1Q02809 727 aaPredicted RBP14.02□□□□□ -0.16
HIPK3-202ENST00000379016 CDH24Q86UP0 819 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 DNAJC10Q8IXB1 793 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 SMYD4Q8IYR2 804 aaPredicted RBP14.02□□□□□ -0.16
HIPK3-202ENST00000379016 MARCH10Q8NA82 808 aaPredicted RBP14.02□□□□□ -0.16
HIPK3-202ENST00000379016 PNMA1Q8ND90 353 aa14.02□□□□□ -0.16
HIPK3-202ENST00000379016 ENO3P13929 434 aaPredicted RBP14.02□□□□□ -0.17
HIPK3-202ENST00000379016 DMPKQ09013 629 aa14.02□□□□□ -0.17
HIPK3-202ENST00000379016 ERICH3Q5RHP9 1530 aa14.02□□□□□ -0.17
HIPK3-202ENST00000379016 LRRC14BA6NHZ5 514 aa14.02□□□□□ -0.17
HIPK3-202ENST00000379016 ERN1O75460 977 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms