RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TMEM150BA6NC51 233 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 HBP1O60381 514 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 VIMP08670 466 aaKnown RBP15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 ATF2P15336 505 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 DYNLT1P63172 113 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 PPP2R5DQ14738 602 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 NAA25Q14CX7 972 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 GJB7Q6PEY0 223 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 C4orf19Q8IY42 314 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 NGRNQ9NPE2 291 aaKnown RBP15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 H7C0C1 242 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 KRT1P04264 644 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 SUPT20HL2P0C7V6 817 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 ATP5OP48047 213 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 GTF2A2P52657 109 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 TMEM62Q0P6H9 643 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 KLHDC7AQ5VTJ3 777 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 EFCAB12Q6NXP0 572 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 BTNL9Q6UXG8 535 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 FBXO16Q8IX29 292 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 AGPAT1Q99943 283 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 MROH8Q9H579 483 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 C17orf75Q9HAS0 396 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 KIAA0391O15091 583 aaKnown RBP15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 MAGEB2O15479 319 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 PPP1R11O60927 126 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 PLEKP08567 350 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 HSPA6P17066 643 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 KRT15P19012 456 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 ATP5DP30049 168 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 SSTR3P32745 418 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 ZNF211Q13398 564 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 IER5Q5VY09 327 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 MFSD14CQ5VZR4 134 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 LRRN4CLQ8ND94 238 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 SLC5A5Q92911 643 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 DUSP9Q99956 384 aaKnown RBP15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 KCNMB3Q9NPA1 279 aa15.2■□□□□ 0.02
SHROOM1-203ENST00000378679 GNGT1P63211 74 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 CROCCP2Q86T23 111 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 CBWD2Q8IUF1 395 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 ASCC2Q9H1I8 757 aaPredicted RBP15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 DNAJC18Q9H819 358 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 ABCB6Q9NP58 842 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 INPP5FQ9Y2H2 1132 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 SCINQ9Y6U3 715 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 A6NJR5 290 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 MIF4GDA9UHW6 222 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 IRF6O14896 467 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 RGS16O15492 202 aaPredicted RBP15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 CYP3A4P08684 503 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 CCDC14Q49A88 953 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 DSTYKQ6XUX3 929 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 RFFLQ8WZ73 363 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 UBE4BO95155 1302 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 ZRANB2O95218 330 aaKnown RBP eCLIP15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 EPHB4P54760 987 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 GALCP54803 685 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 SOX10P56693 466 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 LAMC2Q13753 1193 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 ZNF564Q8TBZ8 553 aaPredicted RBP15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 CDCA5Q96FF9 252 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 KIF12Q96FN5 646 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 OLFML3Q9NRN5 406 aa15.19■□□□□ 0.02
SHROOM1-203ENST00000378679 CTIFO43310 598 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 NCOA4Q13772 614 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 RSRC2Q7L4I2 434 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 RFX6Q8HWS3 928 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 CTAGE3PQ8IX95 158 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 GSPT2Q8IYD1 628 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 PURBQ96QR8 312 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 A0A1W2PQJ5 194 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 GUCY2CP25092 1073 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 ERVK-24P63145 666 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 CDO1Q16878 200 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 CC2D1AQ6P1N0 951 aaPredicted RBP15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 CCDC121Q6ZUS5 278 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 METTL23Q86XA0 190 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 BEST2Q8NFU1 509 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 PI4K2AQ9BTU6 479 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 NUP85Q9BW27 656 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 MRFAP1Q9Y605 127 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 OAZ1P54368 228 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 SEZ6Q53EL9 994 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 MOB2Q70IA6 237 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 CCDC117Q8IWD4 279 aaPredicted RBP15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 NME8Q8N427 588 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 GLIS3Q8NEA6 775 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 NLGN2Q8NFZ4 835 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 FAM114A2Q9NRY5 505 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 ATP8A1Q9Y2Q0 1164 aa15.18■□□□□ 0.02
SHROOM1-203ENST00000378679 AHDC1Q5TGY3 1603 aaPredicted RBP15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 SGK1O00141 431 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 ECEL1O95672 775 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 PPP2R5CQ13362 524 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 ACAP3Q96P50 834 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 HEMGNQ9BXL5 484 aa15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 PPANQ9NQ55 473 aaKnown RBP15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.17■□□□□ 0.02
SHROOM1-203ENST00000378679 CCDC188H7C350 402 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms