RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 UBE4BO95155 1302 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 ICAM1P05362 532 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 ARL4AP40617 200 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 GABPAQ06546 454 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 DACT2Q5SW24 774 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 ZNF710Q8N1W2 664 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 GMCL1Q96IK5 515 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 PNMA5Q96PV4 448 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 L2HGDHQ9H9P8 463 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 KLHL11Q9NVR0 708 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 NFAT5O94916 1531 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 C19orf81C9J6K1 198 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 FAM86B1E9PN63 330 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 PI4K2BG5E9Z4 385 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 AKAP3O75969 853 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 FAM86B2P0C5J1 330 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 SEZ6Q53EL9 994 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 RSPH3Q86UC2 560 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 RBM46Q8TBY0 533 aaKnown RBP14.1□□□□□ -0.15
NPHP4-203ENST00000378169 CBWD1Q9BRT8 395 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 MON2Q7Z3U7 1717 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 TTI1O43156 1089 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 TFRCP02786 760 aaKnown RBP14.1□□□□□ -0.15
NPHP4-203ENST00000378169 PSMC1P62191 440 aaKnown RBP14.1□□□□□ -0.15
NPHP4-203ENST00000378169 NAB2Q15742 525 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 TKFCQ3LXA3 575 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 PDIK1LQ8N165 341 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 DNAAF3Q8N9W5 541 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 SEPT1Q8WYJ6 367 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 ANKS1AQ92625 1134 aa14.1□□□□□ -0.15
NPHP4-203ENST00000378169 THOC1Q96FV9 657 aaKnown RBP14.1□□□□□ -0.15
NPHP4-203ENST00000378169 MOV10L1Q9BXT6 1211 aaKnown RBP14.1□□□□□ -0.15
NPHP4-203ENST00000378169 PIK3R2O00459 728 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 CA4P22748 312 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 MAGOHP61326 146 aaKnown RBP14.09□□□□□ -0.15
NPHP4-203ENST00000378169 PDZD4Q76G19 769 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-203ENST00000378169 SAYSD1Q9NPB0 183 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 NRXN3Q9Y4C0 1643 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 ZBTB39O15060 712 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 TJP3O95049 919 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 ZBED1O96006 694 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 ZSCAN20P17040 1043 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-203ENST00000378169 PPP1R2P3Q6NXS1 205 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 DDX42Q86XP3 938 aaKnown RBP eCLIP14.09□□□□□ -0.15
NPHP4-203ENST00000378169 SIX6OS1Q8N1H7 587 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 SH2D3CQ8N5H7 860 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 CCDC197Q8NCU1 140 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 PYROXD1Q8WU10 500 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 FBXL5Q9UKA1 691 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 HMGB1P1B2RPK0 211 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-203ENST00000378169 PRKCBP05771 671 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 MYL3P08590 195 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 TBXAS1P24557 533 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-203ENST00000378169 ARPP19P56211 112 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 IL9RQ01113 521 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 NT5DC1Q5TFE4 455 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 ABI1Q8IZP0 508 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 SMC1BQ8NDV3 1235 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 TRIM51Q9BSJ1 452 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 GINM1Q9NU53 330 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 BLOC1S4Q9NUP1 217 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 ARHGAP20Q9P2F6 1191 aa14.09□□□□□ -0.15
NPHP4-203ENST00000378169 ABT1Q9ULW3 272 aaKnown RBP14.09□□□□□ -0.15
NPHP4-203ENST00000378169 M0QYV0 167 aa14.08□□□□□ -0.15
NPHP4-203ENST00000378169 RFX1P22670 979 aa14.08□□□□□ -0.15
NPHP4-203ENST00000378169 MSH2P43246 934 aa14.08□□□□□ -0.15
NPHP4-203ENST00000378169 KIF22Q14807 665 aa14.08□□□□□ -0.15
NPHP4-203ENST00000378169 EMC2Q15006 297 aa14.08□□□□□ -0.15
NPHP4-203ENST00000378169 CBWD2Q8IUF1 395 aa14.08□□□□□ -0.15
NPHP4-203ENST00000378169 C2orf69Q8N8R5 385 aa14.08□□□□□ -0.15
NPHP4-203ENST00000378169 GLIS3Q8NEA6 775 aa14.08□□□□□ -0.15
NPHP4-203ENST00000378169 DNAJC7Q99615 494 aa14.08□□□□□ -0.15
NPHP4-203ENST00000378169 PACSIN1Q9BY11 444 aa14.08□□□□□ -0.15
NPHP4-203ENST00000378169 KCND2Q9NZV8 630 aa14.08□□□□□ -0.15
NPHP4-203ENST00000378169 NAGPAQ9UK23 515 aa14.08□□□□□ -0.15
NPHP4-203ENST00000378169 A0A1W2PQJ5 194 aa14.08□□□□□ -0.16
NPHP4-203ENST00000378169 RNASELQ05823 741 aaKnown RBP14.08□□□□□ -0.16
NPHP4-203ENST00000378169 C2CD6Q53TS8 623 aa14.08□□□□□ -0.16
NPHP4-203ENST00000378169 TRIM65Q6PJ69 517 aa14.08□□□□□ -0.16
NPHP4-203ENST00000378169 PPFIBP2Q8ND30 876 aa14.08□□□□□ -0.16
NPHP4-203ENST00000378169 SUCLA2Q9P2R7 463 aaPredicted RBP14.08□□□□□ -0.16
NPHP4-203ENST00000378169 INPP5FQ9Y2H2 1132 aa14.08□□□□□ -0.16
NPHP4-203ENST00000378169 SUN1O94901 812 aa14.08□□□□□ -0.16
NPHP4-203ENST00000378169 CSPG5O95196 566 aa14.08□□□□□ -0.16
NPHP4-203ENST00000378169 COPB2P35606 906 aa14.08□□□□□ -0.16
NPHP4-203ENST00000378169 EIF3BP55884 814 aaKnown RBP14.08□□□□□ -0.16
NPHP4-203ENST00000378169 NAA25Q14CX7 972 aa14.08□□□□□ -0.16
NPHP4-203ENST00000378169 E2F4Q16254 413 aa14.08□□□□□ -0.16
NPHP4-203ENST00000378169 NUGGCQ68CJ6 796 aa14.08□□□□□ -0.16
NPHP4-203ENST00000378169 DUSP9Q99956 384 aaKnown RBP14.08□□□□□ -0.16
NPHP4-203ENST00000378169 TOPORSQ9NS56 1045 aaPredicted RBP14.08□□□□□ -0.16
NPHP4-203ENST00000378169 FZD1Q9UP38 647 aa14.08□□□□□ -0.16
NPHP4-203ENST00000378169 FOXN3O00409 490 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-203ENST00000378169 CPP00450 1065 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 CARSP49589 748 aaKnown RBP14.07□□□□□ -0.16
NPHP4-203ENST00000378169 MDM2Q00987 491 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-203ENST00000378169 DSTYKQ6XUX3 929 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 SRRM1Q8IYB3 904 aaKnown RBP14.07□□□□□ -0.16
NPHP4-203ENST00000378169 CFAP57Q96MR6 1250 aa14.07□□□□□ -0.16
NPHP4-203ENST00000378169 FAM118BQ9BPY3 351 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms