RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 MYO1HQ8N1T3 1032 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 ZNF507Q8TCN5 953 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 SLC16A10Q8TF71 515 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 RAD54LQ92698 747 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 TEX12Q9BXU0 123 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 APPL1Q9UKG1 709 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 LRCH1Q9Y2L9 728 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 PKP1Q13835 747 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 NDUFAF2Q8N183 169 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 SENP7Q9BQF6 1050 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 PAK5Q9P286 719 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 BAG5Q9UL15 447 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 TMEM132AQ24JP5 1023 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 LRRC23Q53EV4 343 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 KLC3Q6P597 504 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 MAPK4P31152 587 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 ZNF268Q14587 947 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 TTC30AQ86WT1 665 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 TTC30BQ8N4P2 665 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 GYG2O15488 501 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 CDR2Q01850 454 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 PDXDC1Q6P996 788 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 ANKRD23Q86SG2 305 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 SLC35F6Q8N357 371 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 MICAL1Q8TDZ2 1067 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 DLG3Q92796 817 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 PUS7LQ9H0K6 701 aaKnown RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 UPF3AQ9H1J1 476 aaKnown RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 BFARQ9NZS9 450 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 MINPP1Q9UNW1 487 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 SATB2Q9UPW6 733 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 GCNT3O95395 438 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 MAPRE1Q15691 268 aaKnown RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 ATAD3BQ5T9A4 648 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 LZTR1Q8N653 840 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 SYT2Q8N9I0 419 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 TMCO1Q9UM00 188 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 MAD1L1Q9Y6D9 718 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 TSC22D3Q99576 134 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 DCAF8L1A6NGE4 600 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 PIK3R2O00459 728 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 STMN1P16949 149 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 PNPLA4P41247 253 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 ANKRD13CQ8N6S4 541 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 ACRBPQ8NEB7 543 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 GDF3Q9NR23 364 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 PTBP2Q9UKA9 531 aaKnown RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 NID2Q14112 1375 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 ADGRA2Q96PE1 1338 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 GRAPQ13588 217 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 GRAPLQ8TC17 118 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 MCF2LO15068 1137 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 XPO6Q96QU8 1125 aaKnown RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 TBC1D8O95759 1140 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 XRCC4Q13426 336 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 TMEM259Q4ZIN3 620 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 IL10P22301 178 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 DGCR14Q96DF8 476 aaKnown RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 DIABLOQ9NR28 239 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 PCDHA10Q9Y5I2 948 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 TLDC2A0PJX2 215 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 FGGP02679 453 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 NCAPHQ15003 741 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 FAM161BQ96MY7 647 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 CA4P22748 312 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 CCDC25Q86WR0 208 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 TUBA8Q9NY65 449 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 DPP8Q6V1X1 898 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 DNAJB7Q7Z6W7 309 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-201ENST00000377861 LRRC6Q86X45 466 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 RIOX1Q9H6W3 641 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 KCNMB3Q9NPA1 279 aa5.25□□□□□ -1.57
PCDH9-201ENST00000377861 KRT3P12035 628 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 CTAGE3PQ8IX95 158 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 LRRC19Q9H756 370 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 IRF5Q13568 498 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 BMT2Q1RMZ1 405 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 PCDHB8Q9UN66 801 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 TRPC5OSA6NMA1 111 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 RPS12P25398 132 aaKnown RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 EPS8Q12929 822 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 MEI1Q5TIA1 1274 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 PRR23BQ6ZRT6 265 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 PPANQ9NQ55 473 aaKnown RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 TRHDEQ9UKU6 1024 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 IRX5P78411 483 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 PRMT9Q6P2P2 845 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 RPUSD2Q8IZ73 545 aaKnown RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 HPS5Q9UPZ3 1129 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 MIS18BP1Q6P0N0 1132 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 TET3O43151 1660 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 COL6A2P12110 1019 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 MAP3K10Q02779 954 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 TTC19Q6DKK2 380 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 KCNQ4P56696 695 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 AP1B1Q10567 949 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 P3H1Q32P28 736 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 CMPK2Q5EBM0 449 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 CLTAP09496 248 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms