RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 TRIM49CP0CI26 452 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 BEND6Q5SZJ8 279 aaPredicted RBP20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 GUF1Q8N442 669 aaKnown RBP20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 WNT8AQ9H1J5 351 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 H0Y3Z8 333 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 CPB1P15086 417 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 GGCXP38435 758 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 TRIM72Q6ZMU5 477 aa20.17■□□□□ 0.82
TBC1D4-201ENST00000377625 DIAPH2O60879 1101 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 ZBTB17Q13105 803 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 MFSD14CQ5VZR4 134 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 ITM2BQ9Y287 266 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 EMSYQ7Z589 1322 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 GRID2IPA4D2P6 1211 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 ATP5HO75947 161 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 USP11P51784 963 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 OR6P1Q8NGX9 317 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 GSG1L2A8MUP6 293 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 ASAP2O43150 1006 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 C1orf146Q5VVC0 180 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 TAS2R42Q7RTR8 314 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 CENPKQ9BS16 269 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 MRPL40Q9NQ50 206 aaKnown RBP20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 RNF181Q9P0P0 153 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 RAPGEF5Q92565 580 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 ING2Q9H160 280 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 DCTN4Q9UJW0 460 aa20.16■□□□□ 0.82
TBC1D4-201ENST00000377625 UBA6A0AVT1 1052 aaPredicted RBP20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 HAUS5O94927 633 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 MCF2P10911 925 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 AP3M2P53677 418 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 DUOXA2Q1HG44 320 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 BTBD8Q5XKL5 378 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 SNF8Q96H20 258 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 TEX12Q9BXU0 123 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 AFF4Q9UHB7 1163 aaKnown RBP20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 TSR3Q9UJK0 312 aaKnown RBP20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 HOXD10P28358 340 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 FBXW4P57775 412 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 NOP53Q9NZM5 478 aaKnown RBP20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 PCDHA10Q9Y5I2 948 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 FDX1P10109 184 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 CYP19A1P11511 503 aaPredicted RBP20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 SMAD1Q15797 465 aaKnown RBP20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 GLYCTKQ8IVS8 523 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 SH3KBP1Q96B97 665 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 ESYT3A0FGR9 886 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 HAUS6Q7Z4H7 955 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 ZC3H18Q86VM9 953 aaKnown RBP20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 NDFIP2Q9NV92 336 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 TTC26A0AVF1 554 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 ZBTB7AO95365 584 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 BRAFP15056 766 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 CCDC137Q6PK04 289 aaKnown RBP20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 ZNF560Q96MR9 790 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 SLC13A1Q9BZW2 595 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 RPAP3Q9H6T3 665 aaPredicted RBP20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 PARVAQ9NVD7 372 aa20.15■□□□□ 0.82
TBC1D4-201ENST00000377625 SYNDIG1LA6NDD5 238 aa20.14■□□□□ 0.82
TBC1D4-201ENST00000377625 SYCE1LA8MT33 242 aa20.14■□□□□ 0.82
TBC1D4-201ENST00000377625 SSTR3P32745 418 aaPredicted RBP20.14■□□□□ 0.82
TBC1D4-201ENST00000377625 EFTUD2Q15029 972 aaKnown RBP eCLIP20.14■□□□□ 0.822e-8■■■□□ 15.4
TBC1D4-201ENST00000377625 RNF135Q8IUD6 432 aa20.14■□□□□ 0.82
TBC1D4-201ENST00000377625 SLC26A7Q8TE54 656 aa20.14■□□□□ 0.82
TBC1D4-201ENST00000377625 ATP6V1E1P36543 226 aa20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 CDH6P55285 790 aa20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 WARS2Q9UGM6 360 aaKnown RBP20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 RFX7Q2KHR2 1363 aa20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 AKR1B1P15121 316 aa20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 RAD51Q06609 339 aa20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 TEDDM1Q5T9Z0 273 aa20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 ATP11CQ8NB49 1132 aa20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 DFFAO00273 331 aa20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 LCP1P13796 627 aa20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 ZFXP17010 805 aaPredicted RBP20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 TMED1Q13445 227 aa20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 EPHA7Q15375 998 aa20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 NUDCD3Q8IVD9 361 aa20.14■□□□□ 0.81
TBC1D4-201ENST00000377625 TEX33O43247 280 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 PPP2R2AP63151 447 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 LDHDQ86WU2 507 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 ADA2Q9NZK5 511 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 FAM187AA6NFU0 413 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 ASB14A6NK59 587 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 COPB2P35606 906 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 RGS9BPQ6ZS82 235 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 NEDD1Q8NHV4 660 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 TRIM45Q9H8W5 580 aaPredicted RBP20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 CDC42BPGQ6DT37 1551 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 PYGLP06737 847 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 ARFIP2P53365 341 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 KYAT1Q16773 422 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 C1orf54Q8WWF1 131 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 TRIM54Q9BYV2 358 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 HERC5Q9UII4 1024 aaKnown RBP20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 RALAP11233 206 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 TAP1Q03518 808 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 ZNF235Q14590 738 aa20.13■□□□□ 0.81
TBC1D4-201ENST00000377625 TGS1Q96RS0 853 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms