RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 CCDC137Q6PK04 289 aaKnown RBP21.93■■□□□ 1.1
CLN5-201ENST00000377453 TATDN2Q93075 761 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 XPO6Q96QU8 1125 aaKnown RBP21.93■■□□□ 1.1
CLN5-201ENST00000377453 STRA6Q9BX79 667 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 HOMER2Q9NSB8 354 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 ATXN2Q99700 1313 aaKnown RBP21.93■■□□□ 1.1
CLN5-201ENST00000377453 SNX1Q13596 522 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 NFIL3Q16649 462 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 LLGL2Q6P1M3 1020 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 MIER3Q7Z3K6 550 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 LDHDQ86WU2 507 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 PABPC3Q9H361 631 aaKnown RBP21.93■■□□□ 1.1
CLN5-201ENST00000377453 PHF2O75151 1096 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 SOX10P56693 466 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 SPATS2Q86XZ4 545 aaKnown RBP21.93■■□□□ 1.1
CLN5-201ENST00000377453 CBWD2Q8IUF1 395 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 CACNA2D3Q8IZS8 1091 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 JPH2Q9BR39 696 aaPredicted RBP21.93■■□□□ 1.1
CLN5-201ENST00000377453 TRIM7Q9C029 511 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 TMEM117Q9H0C3 514 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 HSPBP1Q9NZL4 362 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 SEL1LQ9UBV2 794 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 ODF2LQ9ULJ1 636 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 TRPC6Q9Y210 931 aa21.93■■□□□ 1.1
CLN5-201ENST00000377453 COL11A2P13942 1736 aaPredicted RBP21.92■■□□□ 1.1
CLN5-201ENST00000377453 YDJCA8MPS7 323 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 NFIBO00712 420 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 BCRP11274 1271 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 UGCGQ16739 394 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 SLC27A3Q5K4L6 730 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 PLA2G4FQ68DD2 849 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 OTUD6AQ7L8S5 288 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 YTHDF3Q7Z739 585 aaKnown RBP21.92■■□□□ 1.1
CLN5-201ENST00000377453 ZHX2Q9Y6X8 837 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 ATP8B3O60423 1300 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 DLATP10515 647 aaKnown RBP21.92■■□□□ 1.1
CLN5-201ENST00000377453 PEX5P50542 639 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 GPC5P78333 572 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 PDE4CQ08493 712 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 ANKRD20A8PQ5CZ79 823 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 STXBP4Q6ZWJ1 553 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 EPS8L1Q8TE68 723 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 C1orf54Q8WWF1 131 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 DDX23Q9BUQ8 820 aaKnown RBP21.92■■□□□ 1.1
CLN5-201ENST00000377453 GGT7Q9UJ14 662 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 SERPINA10Q9UK55 444 aa21.92■■□□□ 1.1
CLN5-201ENST00000377453 RARAP10276 462 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 TRIP13Q15645 432 aaPredicted RBP21.91■■□□□ 1.1
CLN5-201ENST00000377453 CCDC105Q8IYK2 499 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 IPO4Q8TEX9 1081 aaKnown RBP21.91■■□□□ 1.1
CLN5-201ENST00000377453 NUP85Q9BW27 656 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 ARHGEF10LQ9HCE6 1279 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 MLXIPLQ9NP71 852 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 KCNH7Q9NS40 1196 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 SPOPO43791 374 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 CREB1P16220 341 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 PDE6BP35913 854 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 PEX3P56589 373 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 ERMARDQ5T6L9 678 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 RHOT2Q8IXI1 618 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 CPXCR1Q8N123 301 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 MGARPQ8TDB4 240 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 PWWP2AQ96N64 755 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 PRMT1Q99873 361 aaKnown RBP21.91■■□□□ 1.1
CLN5-201ENST00000377453 FAM118BQ9BPY3 351 aa21.91■■□□□ 1.1
CLN5-201ENST00000377453 CCDC172P0C7W6 258 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 LRRC14Q15048 493 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 B3GNT9Q6UX72 402 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 ATG4AQ8WYN0 398 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 FAM129AQ9BZQ8 928 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 RANBP17Q9H2T7 1088 aaKnown RBP21.9■■□□□ 1.1
CLN5-201ENST00000377453 VEZTQ9HBM0 779 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 NOCTQ9UK39 431 aaKnown RBP21.9■■□□□ 1.1
CLN5-201ENST00000377453 TMX2Q9Y320 296 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 PCDHA3Q9Y5H8 950 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 MYH11P35749 1972 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 RBBP6Q7Z6E9 1792 aaKnown RBP21.9■■□□□ 1.1
CLN5-201ENST00000377453 FAM187AA6NFU0 413 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 RGS16O15492 202 aaPredicted RBP21.9■■□□□ 1.1
CLN5-201ENST00000377453 CLDN3O15551 220 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 PAEPP09466 180 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 DHX37Q8IY37 1157 aaKnown RBP21.9■■□□□ 1.1
CLN5-201ENST00000377453 LRRC34Q8IZ02 419 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 UBL4BQ8N7F7 174 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 ZNF653Q96CK0 615 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 CHMP6Q96FZ7 201 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 NAP1L3Q99457 506 aaPredicted RBP21.9■■□□□ 1.1
CLN5-201ENST00000377453 MXRA8Q9BRK3 442 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 KLC4Q9NSK0 619 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 USP20Q9Y2K6 914 aa21.9■■□□□ 1.1
CLN5-201ENST00000377453 SLX4Q8IY92 1834 aa21.89■■□□□ 1.1
CLN5-201ENST00000377453 SSTR3P32745 418 aaPredicted RBP21.89■■□□□ 1.09
CLN5-201ENST00000377453 MXI1P50539 228 aa21.89■■□□□ 1.09
CLN5-201ENST00000377453 FMO1Q01740 532 aa21.89■■□□□ 1.09
CLN5-201ENST00000377453 DHX34Q14147 1143 aaKnown RBP21.89■■□□□ 1.09
CLN5-201ENST00000377453 ZNF564Q8TBZ8 553 aaPredicted RBP21.89■■□□□ 1.09
CLN5-201ENST00000377453 ATXN2LQ8WWM7 1075 aaKnown RBP21.89■■□□□ 1.09
CLN5-201ENST00000377453 PI4K2AQ9BTU6 479 aa21.89■■□□□ 1.09
CLN5-201ENST00000377453 TMEM39BQ9GZU3 492 aa21.89■■□□□ 1.09
CLN5-201ENST00000377453 ZBTB12Q9Y330 459 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms