RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 DDX12PQ92771 950 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 SNX27Q96L92 541 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 PSMB7Q99436 277 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 MRIQ9BWK5 157 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 SH2D4AQ9H788 454 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 KANSL2Q9H9L4 492 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 ITGB1BP2Q9UKP3 347 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 PCDHA1Q9Y5I3 950 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 USH1CQ9Y6N9 552 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 MYH4Q9Y623 1939 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 C10orf71Q711Q0 1435 aa16.64■□□□□ 0.26
FXN-201ENST00000377270 GOLGB1Q14789 3259 aaKnown RBP16.64■□□□□ 0.25
FXN-201ENST00000377270 H0YIN7 160 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 HEXIM1O94992 359 aaKnown RBP16.64■□□□□ 0.25
FXN-201ENST00000377270 GSTA2P09210 222 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 CCNFP41002 786 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 ARPC4P59998 168 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 SULT2A1Q06520 285 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 USH1GQ495M9 461 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 CPLX4Q7Z7G2 160 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 PTPRN2Q92932 1015 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 HIC2Q96JB3 615 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 SLC7A5P2Q9GIP4 190 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 PFDN4Q9NQP4 134 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
FXN-201ENST00000377270 A0A0J9YVX5 310 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 ESYT3A0FGR9 886 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 NKRFO15226 690 aaKnown RBP eCLIP16.64■□□□□ 0.25
FXN-201ENST00000377270 CNPY1Q3B7I2 92 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 TMEM119Q4V9L6 283 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 CFAP157Q5JU67 520 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 MIIPQ5JXC2 388 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 UCMAQ8WVF2 138 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 RSPH1Q8WYR4 309 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 IDI2Q9BXS1 227 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 MLXIPQ9HAP2 919 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 ETNK2Q9NVF9 386 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 ARHGEF38Q9NXL2 777 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 NYAP2Q9P242 653 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 HSFX1Q9UBD0 423 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 SCOCQ9UIL1 159 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 ZMYND8Q9ULU4 1186 aaPredicted RBP16.64■□□□□ 0.25
FXN-201ENST00000377270 AGAP1Q9UPQ3 857 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
FXN-201ENST00000377270 STK24Q9Y6E0 443 aa16.64■□□□□ 0.25
FXN-201ENST00000377270 PHF20L1A8MW92 1017 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 GCOM1H8Y6P7 765 aaPredicted RBP16.63■□□□□ 0.25
FXN-201ENST00000377270 MOCS3O95396 460 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 MYZAPP0CAP1 466 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 PTK7Q13308 1070 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 LRIG3Q6UXM1 1119 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 SREK1Q8WXA9 508 aaKnown RBP16.63■□□□□ 0.25
FXN-201ENST00000377270 TTYH3Q9C0H2 523 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 LRRC27Q9C0I9 530 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 SLC4A7Q9Y6M7 1214 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 ZNF263O14978 683 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 MTTPP55157 894 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 CDK17Q00537 523 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 SIAH1Q8IUQ4 282 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 SCUBE1Q8IWY4 988 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 DCAF4Q8WV16 495 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 CCDC42Q96M95 316 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 GBP5Q96PP8 586 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 PPP1R12CQ9BZL4 782 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 HESX1Q9UBX0 185 aa16.63■□□□□ 0.25
FXN-201ENST00000377270 ZSCAN5CA6NGD5 496 aaPredicted RBP16.62■□□□□ 0.25
FXN-201ENST00000377270 CETN3O15182 167 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 GDF11O95390 407 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 HSPA9P38646 679 aaKnown RBP16.62■□□□□ 0.25
FXN-201ENST00000377270 LRRC41Q15345 812 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 CMPK2Q5EBM0 449 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 RASIP1Q5U651 963 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 CCNJLQ8IV13 435 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 SLC7A5P1Q8MH63 180 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 GUF1Q8N442 669 aaKnown RBP16.62■□□□□ 0.25
FXN-201ENST00000377270 RETREG2Q8NC44 543 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 IRF2BPLQ9H1B7 796 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 PLCB1Q9NQ66 1216 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 HIP1RO75146 1068 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 PAEPP09466 180 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 GNAZP19086 355 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 TMOD1P28289 359 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 SNAP25P60880 206 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 ATP11AP98196 1134 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 LSAMPQ13449 338 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 CFAP221Q4G0U5 840 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 MIGA2Q7L4E1 593 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.62■□□□□ 0.25
FXN-201ENST00000377270 NCSTNQ92542 709 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 SH3GL1Q99961 368 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 IFIH1Q9BYX4 1025 aaKnown RBP16.62■□□□□ 0.25
FXN-201ENST00000377270 GLT8D2Q9H1C3 349 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 STK38LQ9Y2H1 464 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 HEY1Q9Y5J3 304 aa16.62■□□□□ 0.25
FXN-201ENST00000377270 GREB1LQ9C091 1923 aaPredicted RBP16.61■□□□□ 0.25
FXN-201ENST00000377270 CHRNA5P30532 468 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 FKBP1AP62942 108 aaKnown RBP16.61■□□□□ 0.25
FXN-201ENST00000377270 OLFML2BQ68BL8 750 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 TATDN1Q6P1N9 297 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 KRT26Q7Z3Y9 468 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms