RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 CAPS2Q9BXY5 557 aa12.05□□□□□ -0.48
UBD-203ENST00000377050 FGFBP2Q9BYJ0 223 aa12.05□□□□□ -0.48
UBD-203ENST00000377050 PRDM12Q9H4Q4 367 aa12.05□□□□□ -0.48
UBD-203ENST00000377050 SLITRK6Q9H5Y7 841 aa12.05□□□□□ -0.48
UBD-203ENST00000377050 DNAJC18Q9H819 358 aa12.05□□□□□ -0.48
UBD-203ENST00000377050 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.05□□□□□ -0.48
UBD-203ENST00000377050 SUCLA2Q9P2R7 463 aaPredicted RBP12.05□□□□□ -0.48
UBD-203ENST00000377050 GGA2Q9UJY4 613 aa12.05□□□□□ -0.48
UBD-203ENST00000377050 NAGPAQ9UK23 515 aa12.05□□□□□ -0.48
UBD-203ENST00000377050 RABGAP1Q9Y3P9 1069 aa12.05□□□□□ -0.48
UBD-203ENST00000377050 MUC6Q6W4X9 2439 aa12.05□□□□□ -0.48
UBD-203ENST00000377050 DNAH12Q6ZR08 3092 aa12.05□□□□□ -0.48
UBD-203ENST00000377050 MYO9BQ13459 2157 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 TRIM43BA6NCK2 446 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 HMGB1P1B2RPK0 211 aaPredicted RBP12.04□□□□□ -0.48
UBD-203ENST00000377050 USP17L15C9J2P7 530 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 USP17L13C9JLJ4 530 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 USP17L11C9JVI0 530 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 USP17L18D6R9N7 530 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 USP17L22D6RA61 530 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 USP17L17D6RBQ6 530 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 USP17L19D6RCP7 530 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 USP17L20D6RJB6 530 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 MPHOSPH10O00566 681 aaKnown RBP12.04□□□□□ -0.48
UBD-203ENST00000377050 NCK2O43639 380 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 BUB1O43683 1085 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 TBC1D12O60347 775 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 PHACTR2O75167 634 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 ZMYND10O75800 440 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 HEXIM1O94992 359 aaKnown RBP12.04□□□□□ -0.48
UBD-203ENST00000377050 NR3C1P04150 777 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 SSBP05455 408 aaKnown RBP eCLIP12.04□□□□□ -0.48
UBD-203ENST00000377050 CLTBP09497 229 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 HOXD13P35453 343 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 SLC16A2P36021 539 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 NAP1L1P55209 391 aaKnown RBP12.04□□□□□ -0.48
UBD-203ENST00000377050 ERVK-9P63128 1117 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 CCNA1P78396 465 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 USP17L24Q0WX57 530 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 PPP2R5AQ15172 486 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 C1orf53Q5VUE5 145 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 CCDC174Q6PII3 467 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 USP17L6PQ6QN14 398 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 ZNF571Q7Z3V5 609 aaPredicted RBP12.04□□□□□ -0.48
UBD-203ENST00000377050 SFR1Q86XK3 245 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 SIAH1Q8IUQ4 282 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 SLC9A9Q8IVB4 645 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 NELFCDQ8IXH7 590 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 EFCAB13Q8IY85 973 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 FAM133AQ8N9E0 248 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 C3orf20Q8ND61 904 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 NEK9Q8TD19 979 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 SEC14L1Q92503 715 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 TRIM43Q96BQ3 446 aaPredicted RBP12.04□□□□□ -0.48
UBD-203ENST00000377050 LRRC45Q96CN5 670 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 SPAG5Q96R06 1193 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 REEP2Q9BRK0 252 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 EHMT1Q9H9B1 1298 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 SIX2Q9NPC8 291 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 NCANO14594 1321 aa12.04□□□□□ -0.48
UBD-203ENST00000377050 A0A087WUV0 522 aaPredicted RBP12.03□□□□□ -0.48
UBD-203ENST00000377050 DDTLA6NHG4 134 aaPredicted RBP12.03□□□□□ -0.48
UBD-203ENST00000377050 F5H6K3 240 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 MSH4O15457 936 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 TBCAO75347 108 aaKnown RBP12.03□□□□□ -0.48
UBD-203ENST00000377050 H2AFZP0C0S5 128 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 MAPTP10636 758 aaKnown RBP12.03□□□□□ -0.48
UBD-203ENST00000377050 BMP1P13497 986 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 PSMC2P35998 433 aaKnown RBP12.03□□□□□ -0.48
UBD-203ENST00000377050 STAT1P42224 750 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 ZNF131P52739 623 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 HADHBP55084 474 aaKnown RBP12.03□□□□□ -0.48
UBD-203ENST00000377050 SNRPFP62306 86 aaKnown RBP12.03□□□□□ -0.48
UBD-203ENST00000377050 ICA1Q05084 483 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 PTK2Q05397 1052 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 KLRC3Q07444 240 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 PPP2R5CQ13362 524 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 ALCAMQ13740 583 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 ALKBH5Q6P6C2 394 aaKnown RBP12.03□□□□□ -0.48
UBD-203ENST00000377050 H2AFVQ71UI9 128 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 SH3BP5LQ7L8J4 393 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 GSPT2Q8IYD1 628 aaKnown RBP12.03□□□□□ -0.48
UBD-203ENST00000377050 ARFGAP2Q8N6H7 521 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 TSEN2Q8NCE0 465 aaKnown RBP12.03□□□□□ -0.48
UBD-203ENST00000377050 TPCN2Q8NHX9 752 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 SLC35C1Q96A29 364 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 DRC1Q96MC2 740 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 ZIM3Q96PE6 472 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 HSD17B14Q9BPX1 270 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.03□□□□□ -0.48
UBD-203ENST00000377050 EPHX3Q9H6B9 360 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 TXNRD2Q9NNW7 524 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 DMAC2Q9NW81 257 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 ADAMTS1Q9UHI8 967 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 ODF2LQ9ULJ1 636 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 PLXNA1Q9UIW2 1896 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 ASTN1O14525 1302 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 ZNF536O15090 1300 aa12.03□□□□□ -0.48
UBD-203ENST00000377050 NPHP3-ACAD11A0A0J9YXS1 232 aa12.02□□□□□ -0.49
UBD-203ENST00000377050 PGRMC1O00264 195 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms