RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 FAM186BQ8IYM0 893 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 SPC24Q8NBT2 197 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 ZSWIM2Q8NEG5 633 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 DNAJB3Q8WWF6 145 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 NLRP7Q8WX94 980 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 FAM212AQ96EL1 285 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 BORCS6Q96GS4 357 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 SCLT1Q96NL6 688 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 FDXACB1Q9BRP7 624 aaPredicted RBP11.43□□□□□ -0.58
PDPN-203ENST00000376061 MKNK1Q9BUB5 465 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 NOC4LQ9BVI4 516 aaKnown RBP11.43□□□□□ -0.58
PDPN-203ENST00000376061 TARS2Q9BW92 718 aaKnown RBP11.43□□□□□ -0.58
PDPN-203ENST00000376061 MRPL4Q9BYD3 311 aaKnown RBP11.43□□□□□ -0.58
PDPN-203ENST00000376061 INO80BQ9C086 356 aaPredicted RBP11.43□□□□□ -0.58
PDPN-203ENST00000376061 ADAMTS10Q9H324 1103 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 FZD8Q9H461 694 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 PCIF1Q9H4Z3 704 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 ARMCX3Q9UH62 379 aaPredicted RBP11.43□□□□□ -0.58
PDPN-203ENST00000376061 STYXL1Q9Y6J8 313 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 ANK1P16157 1881 aa11.43□□□□□ -0.58
PDPN-203ENST00000376061 A0A1W2PQ45 241 aaPredicted RBP11.42□□□□□ -0.58
PDPN-203ENST00000376061 A0A1W2PQY0 241 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 B4GALT5O43286 388 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 EXOC3O60645 756 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 GPR32O75388 356 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 MYCP01106 439 aaPredicted RBP11.42□□□□□ -0.58
PDPN-203ENST00000376061 ADRB2P07550 413 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 TPM2P07951 284 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 IQCF3P0C7M6 154 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 HSPA1AP0DMV8 641 aaKnown RBP11.42□□□□□ -0.58
PDPN-203ENST00000376061 HSPA1BP0DMV9 641 aaKnown RBP11.42□□□□□ -0.58
PDPN-203ENST00000376061 GARTP22102 1010 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 PSMC2P35998 433 aaKnown RBP11.42□□□□□ -0.58
PDPN-203ENST00000376061 PBX1P40424 430 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 LBX1P52954 281 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 ITGA7Q13683 1181 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 AMHR2Q16671 573 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 FAM187BQ17R55 369 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 VWA3BQ502W6 1294 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 TAF2Q6P1X5 1199 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 FBXO46Q6PJ61 603 aaPredicted RBP11.42□□□□□ -0.58
PDPN-203ENST00000376061 SERINC5Q86VE9 423 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 XXYLT1Q8NBI6 393 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 ARRDC4Q8NCT1 418 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 POMGNT1Q8WZA1 660 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 SAAL1Q96ER3 474 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 DEFB118Q96PH6 123 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 HAPLN2Q9GZV7 340 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 METTL14Q9HCE5 456 aaKnown RBP11.42□□□□□ -0.58
PDPN-203ENST00000376061 ANKFY1Q9P2R3 1169 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 PHF24Q9UPV7 400 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 FRMD4BQ9Y2L6 1034 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 CNTNAP2Q9UHC6 1331 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 RALGAPA2Q2PPJ7 1873 aa11.42□□□□□ -0.58
PDPN-203ENST00000376061 A0A0B4J269 797 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 GOLGA8IPA6NC78 632 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 GOLGA8JA6NMD2 632 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 KBTBD13C9JR72 458 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 DNM1LO00429 736 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 PES1O00541 588 aaKnown RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 ACKR2O00590 384 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 ABLIM1O14639 778 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 MAPK13O15264 365 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 CTCFP49711 727 aaPredicted RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 PRPF4BQ13523 1007 aaKnown RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 TSHZ1Q6ZSZ6 1077 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 TMC6Q7Z403 805 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 SRGAP1Q7Z6B7 1085 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 DRC7Q8IY82 874 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 WNT8BQ93098 351 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 ZBTB45Q96K62 511 aaPredicted RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 FBXL18Q96ME1 805 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 GLT1D1Q96MS3 346 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 OSMRQ99650 979 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 ACO2Q99798 780 aaKnown RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 NDST4Q9H3R1 872 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 PRMT7Q9NVM4 692 aaPredicted RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.41□□□□□ -0.58
PDPN-203ENST00000376061 TSPAN1O60635 241 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 CSDE1O75534 798 aaKnown RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 TOM1L1O75674 476 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 DARSP14868 501 aaKnown RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 PROZP22891 400 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 MRPS6P82932 125 aaKnown RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 CDC42EP1Q00587 391 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 UBXN1Q04323 297 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 PTPN11Q06124 597 aaPredicted RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 PPP2R3AQ06190 1150 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 BFSP1Q12934 665 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 SNRNP35Q16560 246 aaKnown RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 DCAF17Q5H9S7 520 aaPredicted RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 ATF7IP2Q5U623 682 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 SPECC1LQ69YQ0 1117 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 SLFN12LQ6IEE8 588 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 MPZL3Q6UWV2 235 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 CBWD2Q8IUF1 395 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 SPNS2Q8IVW8 549 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 GPD1LQ8N335 351 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 SLC35C1Q96A29 364 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 ARMC5Q96C12 935 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms