RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 GPC5P78333 572 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 DHX34Q14147 1143 aaKnown RBP13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 ERMARDQ5T6L9 678 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 SLC47A2Q86VL8 602 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 EPS8L1Q8TE68 723 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 CABS1Q96KC9 395 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 KREMEN1Q96MU8 473 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 XPO6Q96QU8 1125 aaKnown RBP13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 TEKT3Q9BXF9 490 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 GOLGA8IPA6NC78 632 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 GOLGA8JA6NMD2 632 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 CYP26A1O43174 497 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 RASSF9O75901 435 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 CHN1P15882 459 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 CTNNA2P26232 953 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 SPP2Q13103 211 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 C11orf63Q6NUN7 778 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 INTS8Q75QN2 995 aaKnown RBP13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 LDHDQ86WU2 507 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 NEK9Q8TD19 979 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 CD101Q93033 1021 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 POP1Q99575 1024 aaKnown RBP13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 TMEM117Q9H0C3 514 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 GPRC5CQ9NQ84 441 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 KCNH7Q9NS40 1196 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 NOCTQ9UK39 431 aaKnown RBP13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 ZHX2Q9Y6X8 837 aa13.36□□□□□ -0.27
TNFSF13B-201ENST00000375887 COL11A2P13942 1736 aaPredicted RBP13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 YDJCA8MPS7 323 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 DHX15O43143 795 aaKnown RBP13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 CTNND1O60716 968 aaKnown RBP13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 MUTP22033 750 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 PPP2R5EQ16537 467 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 CCDC137Q6PK04 289 aaKnown RBP13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 CCDC121Q6ZUS5 278 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 C3orf20Q8ND61 904 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 SEMA4DQ92854 862 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 AGBL1Q96MI9 1066 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 ZNF317Q96PQ6 595 aaPredicted RBP13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 MXRA8Q9BRK3 442 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 AZI2Q9H6S1 392 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 HSPBP1Q9NZL4 362 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 PCYOX1Q9UHG3 505 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 TRPC6Q9Y210 931 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 PTPN22Q9Y2R2 807 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 SLX4Q8IY92 1834 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 ATP2C2O75185 946 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 ADRB2P07550 413 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 MMEP08473 750 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 FGFR4P22455 802 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 SLCO1A2P46721 670 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 SMTNP53814 917 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 SIX1Q15475 284 aaPredicted RBP13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 ANKRD20A8PQ5CZ79 823 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 SPDYCQ5MJ68 293 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 SWT1Q5T5J6 900 aaKnown RBP13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 DENND2CQ68D51 928 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 CC2D2BQ6DHV5 1058 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 CPLX4Q7Z7G2 160 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 GPATCH11Q8N954 259 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 CEP89Q96ST8 783 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 JPH2Q9BR39 696 aaPredicted RBP13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 ARHGEF10LQ9HCE6 1279 aa13.35□□□□□ -0.27
TNFSF13B-201ENST00000375887 MIF4GDA9UHW6 222 aaKnown RBP13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 RTN2O75298 545 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 RARAP10276 462 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 CHRNA3P32297 505 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 MMP13P45452 471 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 RARRES1P49788 294 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 MYBPC2Q14324 1141 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 TCEAL1Q15170 157 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 CCDC91Q7Z6B0 441 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 PHLDB2Q86SQ0 1253 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 FAM71AQ8IYT1 594 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 CACNA2D3Q8IZS8 1091 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 UBL4BQ8N7F7 174 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 EPS8L3Q8TE67 593 aaKnown RBP13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 ATXN2LQ8WWM7 1075 aaKnown RBP13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 PGM2Q96G03 612 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 FAM129AQ9BZQ8 928 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 SLC40A1Q9NP59 571 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 MRPL11Q9Y3B7 192 aaKnown RBP13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 SYNGAP1Q96PV0 1343 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 TP73O15350 636 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 ALAS1P13196 640 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 RFX1P22670 979 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 FMO1Q01740 532 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 NSMFQ6X4W1 530 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 MIER3Q7Z3K6 550 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 CBWD2Q8IUF1 395 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 XXYLT1Q8NBI6 393 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 CHMP6Q96FZ7 201 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 RPS6KC1Q96S38 1066 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 RIT2Q99578 217 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 CD248Q9HCU0 757 aa13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 LARSQ9P2J5 1176 aaKnown RBP13.34□□□□□ -0.27
TNFSF13B-201ENST00000375887 GOLGA6L7A0A1B0GV03 622 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 NFIBO00712 420 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 SLC16A4O15374 487 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms