RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 RPAINQ86UA6 219 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 PNMA8AQ86V59 439 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 CPNE8Q86YQ8 564 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 P3H4Q92791 437 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 NAP1L3Q99457 506 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 VEZTQ9HBM0 779 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 ABCF3Q9NUQ8 709 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 DIS3Q9Y2L1 958 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 PTPN22Q9Y2R2 807 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 ASAP2O43150 1006 aa15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 FAM13AO94988 1023 aa15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 EZRP15311 586 aaKnown RBP15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 DHX34Q14147 1143 aaKnown RBP15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 LRRC14Q15048 493 aa15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 ZNF746Q6NUN9 644 aaPredicted RBP15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 SAMD7Q7Z3H4 446 aa15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 TPH2Q8IWU9 490 aa15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 AGBL3Q8NEM8 1001 aa15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 CTTNBP2NLQ9P2B4 639 aa15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 ZNF70Q9UC06 446 aaPredicted RBP15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 VAV3Q9UKW4 847 aa15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 AGAP1Q9UPQ3 857 aa15.21■□□□□ 0.03
CLCNKA-202ENST00000375692 ANKRD62A6NC57 917 aa15.21■□□□□ 0.02
CLCNKA-202ENST00000375692 WNT10BO00744 389 aa15.21■□□□□ 0.02
CLCNKA-202ENST00000375692 SLC26A4O43511 780 aa15.21■□□□□ 0.02
CLCNKA-202ENST00000375692 CHMP2AO43633 222 aa15.21■□□□□ 0.02
CLCNKA-202ENST00000375692 EEF2P13639 858 aaKnown RBP15.21■□□□□ 0.02
CLCNKA-202ENST00000375692 KCNJ1P48048 391 aa15.21■□□□□ 0.02
CLCNKA-202ENST00000375692 Q4G0T1 1027 aa15.21■□□□□ 0.02
CLCNKA-202ENST00000375692 CCDC25Q86WR0 208 aa15.21■□□□□ 0.02
CLCNKA-202ENST00000375692 CCDC63Q8NA47 563 aa15.21■□□□□ 0.02
CLCNKA-202ENST00000375692 MGARPQ8TDB4 240 aa15.21■□□□□ 0.02
CLCNKA-202ENST00000375692 ASTN2O75129 1339 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 ZNF541Q9H0D2 1346 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 FOXO6A8MYZ6 492 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 PHF2O75151 1096 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 EYA4O95677 639 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 FTLP02792 175 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 C6orf118Q5T5N4 469 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 SLFN13Q68D06 897 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 OTUD6AQ7L8S5 288 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 MAGEC3Q8TD91 643 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 DONSONQ9NYP3 566 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 SAMD15Q9P1V8 674 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 APEX2Q9UBZ4 518 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 SLC12A4Q9UP95 1085 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 FZD9O00144 591 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 TULP1O00294 542 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 GMPSP49915 693 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 DRG2P55039 364 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 MESDQ14696 234 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 PPP2R5EQ16537 467 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 CCDC137Q6PK04 289 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 TRPM8Q7Z2W7 1104 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 POP1Q99575 1024 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 AGPAT1Q99943 283 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 GLT8D2Q9H1C3 349 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 OLFML3Q9NRN5 406 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 RASAL2Q9UJF2 1139 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 PCDHA3Q9Y5H8 950 aa15.2■□□□□ 0.02
CLCNKA-202ENST00000375692 ATMINO43313 823 aaPredicted RBP15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 HLA-DOAP06340 250 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 CREB1P16220 341 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 YBX3P16989 372 aaKnown RBP eCLIP15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 ZNF76P36508 570 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 JAG1P78504 1218 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 AUHQ13825 339 aaKnown RBP15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 MOXD1Q6UVY6 613 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 HOOK2Q96ED9 719 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 STAMBPL1Q96FJ0 436 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 TMEM39BQ9GZU3 492 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 MLXIPLQ9NP71 852 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 MYOZ2Q9NPC6 264 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 L3MBTL1Q9Y468 752 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 FRMPD4Q14CM0 1322 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 FOCADQ5VW36 1801 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 RASGRF2O14827 1237 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 TBX3O15119 743 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 RIPK2O43353 540 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 AGTP01019 485 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 PYGMP11217 842 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 AP3B2Q13367 1082 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 ITIH4Q14624 930 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 RRP1BQ14684 758 aaKnown RBP15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 TNIP1Q15025 636 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 CNGA2Q16280 664 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 DYDC2Q96IM9 177 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 BTBD6Q96KE9 485 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 FAM20AQ96MK3 541 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 TACO1Q9BSH4 297 aaKnown RBP15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 UBE2TQ9NPD8 197 aaPredicted RBP15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 PI4KBQ9UBF8 816 aa15.19■□□□□ 0.02
CLCNKA-202ENST00000375692 LTBP3Q9NS15 1303 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 COMTP21964 271 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 CHRNA3P32297 505 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 SLC8A1P32418 973 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 KCNJ2P63252 427 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 DLG4P78352 724 aa15.18■□□□□ 0.02
CLCNKA-202ENST00000375692 MYL7Q01449 175 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms