RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 PKD1L3Q7Z443 1732 aa14.08□□□□□ -0.16
CUL4A-203ENST00000375441 BTNL10A8MVZ5 291 aa14.08□□□□□ -0.16
CUL4A-203ENST00000375441 NPR1P16066 1061 aa14.08□□□□□ -0.16
CUL4A-203ENST00000375441 IFI35P80217 286 aaPredicted RBP14.08□□□□□ -0.16
CUL4A-203ENST00000375441 ANKRD20A8PQ5CZ79 823 aa14.08□□□□□ -0.16
CUL4A-203ENST00000375441 NLGN1Q8N2Q7 840 aa14.08□□□□□ -0.16
CUL4A-203ENST00000375441 GBP7Q8N8V2 638 aaPredicted RBP14.08□□□□□ -0.16
CUL4A-203ENST00000375441 LNX1Q8TBB1 728 aaPredicted RBP14.08□□□□□ -0.16
CUL4A-203ENST00000375441 ECT2Q9H8V3 914 aa14.08□□□□□ -0.16
CUL4A-203ENST00000375441 OLFML3Q9NRN5 406 aa14.08□□□□□ -0.16
CUL4A-203ENST00000375441 RASA4BC9J798 803 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 RASA4O43374 803 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 RASA3Q14644 834 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 KYNUQ16719 465 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 Q4G0T1 1027 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 CBWD6Q4V339 395 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 CBWD3Q5JTY5 395 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 CBWD5Q5RIA9 395 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 HP1BP3Q5SSJ5 553 aaPredicted RBP14.07□□□□□ -0.16
CUL4A-203ENST00000375441 PPP1R21Q6ZMI0 780 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 ZNF720Q7Z2F6 126 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 YTHDF3Q7Z739 585 aaKnown RBP14.07□□□□□ -0.16
CUL4A-203ENST00000375441 CEP170P1Q96L14 293 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 SMC6Q96SB8 1091 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 STK32BQ9NY57 414 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 TAS2R14Q9NYV8 317 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 HSPBP1Q9NZL4 362 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 PCDHB4Q9Y5E5 795 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 P4HBP07237 508 aaKnown RBP14.07□□□□□ -0.16
CUL4A-203ENST00000375441 COILP38432 576 aaPredicted RBP14.07□□□□□ -0.16
CUL4A-203ENST00000375441 ARHGEF16Q5VV41 709 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 KRT39Q6A163 491 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 ZFPM1Q8IX07 1006 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 MORC4Q8TE76 937 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 TGS1Q96RS0 853 aaKnown RBP14.07□□□□□ -0.16
CUL4A-203ENST00000375441 ASTN1O14525 1302 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 GAKO14976 1311 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 LRP6O75581 1613 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 TMEM120BA0PK00 339 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 DDTLA6NHG4 134 aaPredicted RBP14.07□□□□□ -0.16
CUL4A-203ENST00000375441 SHBGP04278 402 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 ATP2A2P16615 1042 aaKnown RBP14.07□□□□□ -0.16
CUL4A-203ENST00000375441 PIK3CAP42336 1068 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 BPIFB4P59827 614 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 HYIQ5T013 277 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 SLC13A5Q86YT5 568 aaPredicted RBP14.07□□□□□ -0.16
CUL4A-203ENST00000375441 CCDC89Q8N998 374 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 TRPC6Q9Y210 931 aa14.07□□□□□ -0.16
CUL4A-203ENST00000375441 ZNF142P52746 1687 aaPredicted RBP14.06□□□□□ -0.16
CUL4A-203ENST00000375441 MEIS2O14770 477 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 SGPL1O95470 568 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 MCF2L2Q86YR7 1114 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 PASD1Q8IV76 773 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 USP15Q9Y4E8 981 aaPredicted RBP14.06□□□□□ -0.16
CUL4A-203ENST00000375441 MXRA7P84157 204 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 QPCTQ16769 361 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 BRDTQ58F21 947 aaPredicted RBP14.06□□□□□ -0.16
CUL4A-203ENST00000375441 NOP53Q9NZM5 478 aaKnown RBP14.06□□□□□ -0.16
CUL4A-203ENST00000375441 CFAP73A6NFT4 308 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 MMP10P09238 476 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 SPATA31C1P0DKV0 1188 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 CD19P15391 556 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 CA4P22748 312 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 ELF1P32519 619 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 QARSP47897 775 aaKnown RBP14.06□□□□□ -0.16
CUL4A-203ENST00000375441 RASSF2P50749 326 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 ZNF449Q6P9G9 518 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 PPP1R14CQ8TAE6 165 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 KRT35Q92764 455 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 RNF25Q96BH1 459 aaPredicted RBP14.06□□□□□ -0.16
CUL4A-203ENST00000375441 TRIM11Q96F44 468 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 SNF8Q96H20 258 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 C9orf72Q96LT7 481 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 FAM118BQ9BPY3 351 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 C11orf70Q9BRQ4 267 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 SAYSD1Q9NPB0 183 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.06□□□□□ -0.161e-5■■■■□ 19.8
CUL4A-203ENST00000375441 TTC7AQ9ULT0 858 aaPredicted RBP14.06□□□□□ -0.16
CUL4A-203ENST00000375441 DCDC2CA8MYV0 355 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 ECM2O94769 699 aaPredicted RBP14.06□□□□□ -0.16
CUL4A-203ENST00000375441 SCP2P22307 547 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 EPC2Q52LR7 807 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 TRMT10CQ7L0Y3 403 aaKnown RBP14.06□□□□□ -0.16
CUL4A-203ENST00000375441 COL23A1Q86Y22 540 aaPredicted RBP14.06□□□□□ -0.16
CUL4A-203ENST00000375441 LRRC57Q8N9N7 239 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 HES6Q96HZ4 224 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 CBWD1Q9BRT8 395 aa14.06□□□□□ -0.16
CUL4A-203ENST00000375441 ZC3H4Q9UPT8 1303 aaKnown RBP14.06□□□□□ -0.16
CUL4A-203ENST00000375441 DENND3A2RUS2 1198 aa14.05□□□□□ -0.16
CUL4A-203ENST00000375441 DKC1O60832 514 aaKnown RBP eCLIP14.05□□□□□ -0.162e-6■■■□□ 19.1
CUL4A-203ENST00000375441 RPL21P46778 160 aaKnown RBP14.05□□□□□ -0.16
CUL4A-203ENST00000375441 EPM2AIP1Q7L775 607 aaPredicted RBP14.05□□□□□ -0.16
CUL4A-203ENST00000375441 SPATA21Q7Z572 469 aa14.05□□□□□ -0.16
CUL4A-203ENST00000375441 KIF2BQ8N4N8 673 aa14.05□□□□□ -0.16
CUL4A-203ENST00000375441 CFAP57Q96MR6 1250 aa14.05□□□□□ -0.16
CUL4A-203ENST00000375441 SLITRK3O94933 977 aa14.05□□□□□ -0.16
CUL4A-203ENST00000375441 SNHG28P0DPA3 235 aa14.05□□□□□ -0.16
CUL4A-203ENST00000375441 TROVE2P10155 538 aaKnown RBP eCLIP14.05□□□□□ -0.16
CUL4A-203ENST00000375441 MTMR1Q13613 665 aa14.05□□□□□ -0.16
CUL4A-203ENST00000375441 LMNTD2Q8IXW0 634 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms