RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SPATA21Q7Z572 469 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 ERGIC2Q96RQ1 377 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 TMEM117Q9H0C3 514 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 ETNK1Q9HBU6 452 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 PCSK1NQ9UHG2 260 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 SSX2IPQ9Y2D8 614 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 LAMA4Q16363 1823 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 FAM187AA6NFU0 413 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 TRPA1O75762 1119 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 DCTN3O75935 186 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 NPR1P16066 1061 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 FGFR2P21802 821 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 COMTP21964 271 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 DAGLBQ8NCG7 672 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 PIP4K2CQ8TBX8 421 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 CNKSR1Q969H4 720 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 KIFC3Q9BVG8 833 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 ANLNQ9NQW6 1124 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 TNS2Q63HR2 1409 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 A0A087X0T9 212 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 MIF4GDA9UHW6 222 aaKnown RBP6.98□□□□□ -1.29
SMC1A-202ENST00000375340 LPXNO60711 386 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 FAM228BP0C875 321 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 PLA2G4FQ68DD2 849 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 FGFR1OP2Q9NVK5 253 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 PLEKHG2Q9H7P9 1386 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 EYA4O95677 639 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 PDE1BQ01064 536 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 AGBL2Q5U5Z8 902 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 C4orf33Q8N1A6 199 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 AENQ8WTP8 325 aaKnown RBP6.98□□□□□ -1.29
SMC1A-202ENST00000375340 SLC20A1Q8WUM9 679 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 STK33Q9BYT3 514 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 AS3MTQ9HBK9 375 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 NFAT5O94916 1531 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 PABPN1LA6NDY0 278 aaKnown RBP6.98□□□□□ -1.29
SMC1A-202ENST00000375340 RCCD1A6NED2 376 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 ESRRAP11474 423 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-202ENST00000375340 YWHABP31946 246 aaKnown RBP6.98□□□□□ -1.29
SMC1A-202ENST00000375340 KCNJ1P48048 391 aa6.98□□□□□ -1.29
SMC1A-202ENST00000375340 SPATS2LQ9NUQ6 558 aaKnown RBP6.98□□□□□ -1.29
SMC1A-202ENST00000375340 PPARGC1AQ9UBK2 798 aaKnown RBP6.98□□□□□ -1.29
SMC1A-202ENST00000375340 PDXKO00764 312 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 USP11P51784 963 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 ERICH1Q86X53 443 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 CEP120Q8N960 986 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 RGPD1P0DJD0 1748 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 PRPSAP2O60256 369 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 RNF8O76064 485 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 MYBL2P10244 700 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 ALDH18A1P54886 795 aaKnown RBP6.97□□□□□ -1.29
SMC1A-202ENST00000375340 AP1ARQ63HQ0 302 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 CDC42EP5Q6NZY7 148 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 SCOCQ9UIL1 159 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 INO80B-WBP1J3KQ70 363 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 IPO5O00410 1097 aaKnown RBP6.97□□□□□ -1.29
SMC1A-202ENST00000375340 GYG2O15488 501 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 CFLARO15519 480 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 CAND2O75155 1236 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 ITGA8P53708 1063 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 ZNF571Q7Z3V5 609 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-202ENST00000375340 LRRC34Q8IZ02 419 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 CCHCR1Q8TD31 782 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 NUDCD1Q96RS6 583 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 INO80BQ9C086 356 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-202ENST00000375340 GABBR1Q9UBS5 961 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 SSU72P8A0A1W2PR75 194 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 CASP4P49662 377 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 COG7P83436 770 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 TMPRSS15P98073 1019 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 ALCAMQ13740 583 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 C2CD6Q53TS8 623 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 CC2D2BQ6DHV5 1058 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 BARGINQ6ZT62 677 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 CCNYQ8ND76 341 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 TBC1D16Q8TBP0 767 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 MTMR8Q96EF0 704 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 LRRC37BQ96QE4 947 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 DDX23Q9BUQ8 820 aaKnown RBP6.97□□□□□ -1.29
SMC1A-202ENST00000375340 ANGPTL2Q9UKU9 493 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 IQANK1A0A1B0GTG1 560 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 ZNF233A6NK53 670 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 PDE2AO00408 941 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-202ENST00000375340 CASQ2O14958 399 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-202ENST00000375340 DIAPH2O60879 1101 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 SGPL1O95470 568 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 MEI1Q5TIA1 1274 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 RASIP1Q5U651 963 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 GLIS3Q8NEA6 775 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 NLRP7Q8WX94 980 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 NLRP4Q96MN2 994 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 SLC13A1Q9BZW2 595 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 TRABDQ9H4I3 376 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 VCPKMTQ9H867 229 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 PPP1R9AQ9ULJ8 1098 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 HEY1Q9Y5J3 304 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 CFAP69A5D8W1 941 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 F5H6K3 240 aa6.97□□□□□ -1.29
SMC1A-202ENST00000375340 HOXA7P31268 230 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-202ENST00000375340 ARL4CP56559 192 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms