RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ATP6V0A4Q9HBG4 840 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 TNS3Q68CZ2 1445 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 CFAP69A5D8W1 941 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 PHF2O75151 1096 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 MX2P20592 715 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 PTGISQ16647 500 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 JAMLQ86YT9 394 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 IL17RAQ96F46 866 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 NLRP4Q96MN2 994 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 LRRC4Q9HBW1 653 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 STRIP2Q9ULQ0 834 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 USP15Q9Y4E8 981 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-203ENST00000375274 NUB1Q9Y5A7 615 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 A0A087X0T9 212 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 FAM228BP0C875 321 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 KRT3P12035 628 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 TRMT10CQ7L0Y3 403 aaKnown RBP12.28□□□□□ -0.44
PTCH1-203ENST00000375274 SYN2Q92777 582 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-203ENST00000375274 ERP44Q9BS26 406 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 CELF4Q9BZC1 486 aaKnown RBP12.28□□□□□ -0.44
PTCH1-203ENST00000375274 IPO11Q9UI26 975 aaKnown RBP12.28□□□□□ -0.44
PTCH1-203ENST00000375274 HEY1Q9Y5J3 304 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 RASA1P20936 1047 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 TBXAS1P24557 533 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-203ENST00000375274 FIGNQ5HY92 759 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 C1orf146Q5VVC0 180 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 TTI2Q6NXR4 508 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 LRRN4CLQ8ND94 238 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 ZNF526Q8TF50 670 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-203ENST00000375274 SNX25Q9H3E2 840 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 UVRAGQ9P2Y5 699 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 PCSK1NQ9UHG2 260 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 IP6K2Q9UHH9 426 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 KRT7P08729 469 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 MYBL1P10243 752 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 CAPRIN2Q6IMN6 1127 aaKnown RBP12.28□□□□□ -0.44
PTCH1-203ENST00000375274 TRIM72Q6ZMU5 477 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 BZW1Q7L1Q6 419 aaKnown RBP12.28□□□□□ -0.44
PTCH1-203ENST00000375274 CLEC10AQ8IUN9 316 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 C9orf72Q96LT7 481 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.28□□□□□ -0.44
PTCH1-203ENST00000375274 BCS1LQ9Y276 419 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 FIS1Q9Y3D6 152 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 CAMSAP1Q5T5Y3 1602 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 PRLRP16471 622 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 KPNA2P52292 529 aaKnown RBP12.28□□□□□ -0.44
PTCH1-203ENST00000375274 FAM161BQ96MY7 647 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 CENPKQ9BS16 269 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 TUFT1Q9NNX1 390 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 LCMT1Q9UIC8 334 aa12.28□□□□□ -0.44
PTCH1-203ENST00000375274 DBR1Q9UK59 544 aaKnown RBP12.28□□□□□ -0.44
PTCH1-203ENST00000375274 COL3A1P02461 1466 aaPredicted RBP12.27□□□□□ -0.44
PTCH1-203ENST00000375274 USP32Q8NFA0 1604 aa12.27□□□□□ -0.44
PTCH1-203ENST00000375274 ZC3H13Q5T200 1668 aaKnown RBP12.27□□□□□ -0.44
PTCH1-203ENST00000375274 HSPA4LO95757 839 aa12.27□□□□□ -0.44
PTCH1-203ENST00000375274 LONRF1Q17RB8 773 aa12.27□□□□□ -0.44
PTCH1-203ENST00000375274 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.27□□□□□ -0.44
PTCH1-203ENST00000375274 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.44
PTCH1-203ENST00000375274 ANKZF1Q9H8Y5 726 aa12.27□□□□□ -0.44
PTCH1-203ENST00000375274 SLC9A2Q9UBY0 812 aa12.27□□□□□ -0.44
PTCH1-203ENST00000375274 ALG6Q9Y672 507 aa12.27□□□□□ -0.44
PTCH1-203ENST00000375274 UBE4BO95155 1302 aa12.27□□□□□ -0.44
PTCH1-203ENST00000375274 EIF4E1BA6NMX2 242 aaKnown RBP12.27□□□□□ -0.45
PTCH1-203ENST00000375274 PDHBP11177 359 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 SFNP31947 248 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.45
PTCH1-203ENST00000375274 ARSEP51690 589 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 TRPM8Q7Z2W7 1104 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 TTC1Q99614 292 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 FLT1P17948 1338 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 PFDN6O15212 129 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 FOXP2O15409 715 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 TMEM253P0C7T8 217 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 ITIH2P19823 946 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 EPHB1P54762 984 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 PSMC5P62195 406 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 MAPK6Q16659 721 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 ZNF699Q32M78 642 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 FBXL16Q8N461 479 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 ARL8AQ96BM9 186 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 OSBPL1AQ9BXW6 950 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 TRABDQ9H4I3 376 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 KBTBD4Q9NVX7 518 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 ASNSD1Q9NWL6 643 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 NAGPAQ9UK23 515 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 BAG5Q9UL15 447 aa12.27□□□□□ -0.45
PTCH1-203ENST00000375274 TBX3O15119 743 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 LPXNO60711 386 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 HSD17B3P37058 310 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 KLHDC7AQ5VTJ3 777 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 RBM15Q96T37 977 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTCH1-203ENST00000375274 SMYD3Q9H7B4 428 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 SUCLA2Q9P2R7 463 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-203ENST00000375274 PITPNM2Q9BZ72 1349 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 ESYT2A0FGR8 921 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 ABL1P00519 1130 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 MYBP10242 640 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 HNRNPH1P31943 449 aaKnown RBP12.26□□□□□ -0.45
PTCH1-203ENST00000375274 SLC1A1P43005 524 aa12.26□□□□□ -0.45
PTCH1-203ENST00000375274 CARD9Q9H257 536 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms