RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 INO80B-WBP1J3KQ70 363 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 P4HBP07237 508 aaKnown RBP15.75■□□□□ 0.11
PTCH1-202ENST00000375271 XBP1P17861 261 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 CYP3A7P24462 503 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 AXLP30530 894 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 MLH1P40692 756 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 EMC2Q15006 297 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 PCBP1Q15365 356 aaKnown RBP eCLIP15.75■□□□□ 0.11
PTCH1-202ENST00000375271 XKR9Q5GH70 373 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 MRPL10Q7Z7H8 261 aaKnown RBP15.75■□□□□ 0.11
PTCH1-202ENST00000375271 PALB2Q86YC2 1186 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 GLYCTKQ8IVS8 523 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 RSAD2Q8WXG1 361 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 CCDC51Q96ER9 411 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 MTRQ99707 1265 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 NAP1L4Q99733 375 aaKnown RBP15.75■□□□□ 0.11
PTCH1-202ENST00000375271 IFT122Q9HBG6 1241 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 ARHGEF3Q9NR81 526 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 EPS15L1Q9UBC2 864 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 SIT1Q9Y3P8 196 aa15.75■□□□□ 0.11
PTCH1-202ENST00000375271 DMDP11532 3685 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 RFPL2O75678 378 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 BAG4O95429 457 aaKnown RBP15.74■□□□□ 0.11
PTCH1-202ENST00000375271 MXD4Q14582 209 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-202ENST00000375271 INF2Q27J81 1249 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 LIN9Q5TKA1 542 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 DGLUCYQ7Z3D6 616 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 KIAA2013Q8IYS2 634 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 FAM177A1Q8N128 213 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-202ENST00000375271 ETNPPLQ8TBG4 499 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 HDAC7Q8WUI4 952 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 SHDQ96IW2 340 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 FAM20AQ96MK3 541 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 CEP89Q96ST8 783 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 GAD1Q99259 594 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 LXNQ9BS40 222 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 ZDHHC7Q9NXF8 308 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 IPPQ9Y573 584 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 SNX14Q9Y5W7 946 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 R4GN57 208 aa15.74■□□□□ 0.11
PTCH1-202ENST00000375271 ARL5CA6NH57 179 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 B4GALT3O60512 393 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 REC8O95072 547 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 STBD1O95210 358 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 SPATA31D3P0C874 917 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 GCFC2P16383 781 aaKnown RBP15.73■□□□□ 0.11
PTCH1-202ENST00000375271 PDIA3P30101 505 aaKnown RBP15.73■□□□□ 0.11
PTCH1-202ENST00000375271 YWHABP31946 246 aaKnown RBP15.73■□□□□ 0.11
PTCH1-202ENST00000375271 SCNN1GP51170 649 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 PPP2R5CQ13362 524 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 NTRK3Q16288 839 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 USP41Q3LFD5 358 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 NCAPH2Q6IBW4 605 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 PPP4R3AQ6IN85 833 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 SPATA31D4Q6ZUB0 917 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 NEK8Q86SG6 692 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 COLGALT2Q8IYK4 626 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 SLC44A3Q8N4M1 653 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 GPR152Q8TDT2 470 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 RHOBTB2Q9BYZ6 727 aa15.73■□□□□ 0.11
PTCH1-202ENST00000375271 DHX33Q9H6R0 707 aaKnown RBP15.73■□□□□ 0.11
PTCH1-202ENST00000375271 KRBA1A5PL33 1030 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 CCNT1O60563 726 aaKnown RBP15.72■□□□□ 0.11
PTCH1-202ENST00000375271 LILRB3O75022 631 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 TADA2AO75478 443 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 CDKL5O76039 1030 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 DCNP07585 359 aaKnown RBP15.72■□□□□ 0.11
PTCH1-202ENST00000375271 HSPA4P34932 840 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 AFF1P51825 1210 aaKnown RBP15.72■□□□□ 0.11
PTCH1-202ENST00000375271 DSG1Q02413 1049 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 TMEM132AQ24JP5 1023 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 FUT10Q6P4F1 479 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 DCLRE1AQ6PJP8 1040 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 B3GNT9Q6UX72 402 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 CENPQQ7L2Z9 268 aaPredicted RBP15.72■□□□□ 0.11
PTCH1-202ENST00000375271 FERMT3Q86UX7 667 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 FBXL16Q8N461 479 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 DAGLBQ8NCG7 672 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 FEZF2Q8TBJ5 459 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 MYADMQ96S97 322 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 ZSWIM4Q9H7M6 989 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 RXFP1Q9HBX9 757 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 MARCH5Q9NX47 278 aa15.72■□□□□ 0.11
PTCH1-202ENST00000375271 ZFP37Q9Y6Q3 630 aaPredicted RBP15.72■□□□□ 0.11
PTCH1-202ENST00000375271 TDRD15B5MCY1 1934 aaKnown RBP15.72■□□□□ 0.11
PTCH1-202ENST00000375271 SF3B1O75533 1304 aaKnown RBP eCLIP15.71■□□□□ 0.11
PTCH1-202ENST00000375271 EML1O00423 815 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 SLC37A4O43826 429 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 KINO60870 393 aaKnown RBP15.71■□□□□ 0.11
PTCH1-202ENST00000375271 N4BP1O75113 896 aaKnown RBP15.71■□□□□ 0.11
PTCH1-202ENST00000375271 LAMP2P13473 410 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 FSHRP23945 695 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 HOXA11P31270 313 aaPredicted RBP15.71■□□□□ 0.11
PTCH1-202ENST00000375271 EPHA7Q15375 998 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 UBXN11Q5T124 520 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 PHLDB3Q6NSJ2 640 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 C4orf19Q8IY42 314 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 RUBCNQ92622 972 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 CPB2Q96IY4 423 aa15.71■□□□□ 0.11
PTCH1-202ENST00000375271 EIF2AQ9BY44 585 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms