RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 RUFY4Q6ZNE9 571 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 SPATS2Q86XZ4 545 aaKnown RBP15.06■□□□□ 0
HMGCL-203ENST00000374490 KSR1Q8IVT5 923 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 SCYL3Q8IZE3 742 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 XXYLT1Q8NBI6 393 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 LMO3Q8TAP4 145 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 PIK3R5Q8WYR1 880 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 KIAA1683Q9H0B3 1180 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.06■□□□□ 0
HMGCL-203ENST00000374490 UTP11Q9Y3A2 253 aaKnown RBP15.06■□□□□ 0
HMGCL-203ENST00000374490 TULP1O00294 542 aaPredicted RBP15.06■□□□□ 0
HMGCL-203ENST00000374490 DDX3YO15523 660 aaKnown RBP15.06■□□□□ 0
HMGCL-203ENST00000374490 DHX15O43143 795 aaKnown RBP15.06■□□□□ 0
HMGCL-203ENST00000374490 FDX1P10109 184 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 SFNP31947 248 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 GTF2BQ00403 316 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 BIRC3Q13489 604 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 PLS1Q14651 629 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 SLC30A10Q6XR72 485 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 C4orf19Q8IY42 314 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 RDM1Q8NG50 284 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 CLEC4DQ8WXI8 215 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 ANKEF1Q9NU02 776 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 FEZ2Q9UHY8 353 aaPredicted RBP15.06■□□□□ 0
HMGCL-203ENST00000374490 PLAAQ9Y263 795 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 ZHX2Q9Y6X8 837 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 ZNF536O15090 1300 aa15.05■□□□□ 0
HMGCL-203ENST00000374490 GRIN2DO15399 1336 aa15.05■□□□□ 0
HMGCL-203ENST00000374490 EMSYQ7Z589 1322 aa15.05■□□□□ 0
HMGCL-203ENST00000374490 DDX39AO00148 427 aaKnown RBP15.05■□□□□ -0
HMGCL-203ENST00000374490 EBAG9O00559 213 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 ERLIN2O94905 339 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 GGPS1O95749 300 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 ECHS1P30084 290 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 GBP1P32455 592 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 CORO7P57737 925 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 PTENP60484 403 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 ENPEPQ07075 957 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 DHX34Q14147 1143 aaKnown RBP15.05■□□□□ -0
HMGCL-203ENST00000374490 ARHGAP44Q17R89 818 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 PRAMEF18Q5VWM3 479 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 PHLDB3Q6NSJ2 640 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 XRRA1Q6P2D8 792 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
HMGCL-203ENST00000374490 EFCAB13Q8IY85 973 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 UBL4BQ8N7F7 174 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 AGBL1Q96MI9 1066 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 AP1M1Q9BXS5 423 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 DDX47Q9H0S4 455 aaKnown RBP15.05■□□□□ -0
HMGCL-203ENST00000374490 IKZF4Q9H2S9 585 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 GOLPH3Q9H4A6 298 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 TMBIM4Q9HC24 238 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 FBXO28Q9NVF7 368 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 ZNF112Q9UJU3 913 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 SYNGAP1Q96PV0 1343 aa15.05■□□□□ -0
HMGCL-203ENST00000374490 MYZAPP0CAP1 466 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 NR1D1P20393 614 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 NCKAP1LP55160 1127 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 PSMC5P62195 406 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 KRT76Q01546 638 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 MTMR1Q13613 665 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 AGBL2Q5U5Z8 902 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 FOXR1Q6PIV2 292 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 B4GALNT4Q76KP1 1039 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 RASAL3Q86YV0 1011 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 BCAS4Q8TDM0 211 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 RUNDC3BQ96NL0 473 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 RPS6KC1Q96S38 1066 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 UBE2TQ9NPD8 197 aaPredicted RBP15.04■□□□□ -0
HMGCL-203ENST00000374490 OSGEPQ9NPF4 335 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 SEPT11Q9NVA2 429 aaKnown RBP15.04■□□□□ -0
HMGCL-203ENST00000374490 HSPBP1Q9NZL4 362 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 RASAL2Q9UJF2 1139 aa15.04■□□□□ -0
HMGCL-203ENST00000374490 ATXN2Q99700 1313 aaKnown RBP15.04■□□□□ -0
HMGCL-203ENST00000374490 POLR2AP24928 1970 aaKnown RBP15.04■□□□□ -0
HMGCL-203ENST00000374490 FOXN3O00409 490 aaPredicted RBP15.03■□□□□ -0
HMGCL-203ENST00000374490 DKC1O60832 514 aaKnown RBP eCLIP15.03■□□□□ -0
HMGCL-203ENST00000374490 RTN2O75298 545 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 MTA2O94776 668 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 KRT14P02533 472 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 FGGP02679 453 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 GZMAP12544 262 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 ABCB4P21439 1286 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 HSD17B3P37058 310 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 MAGEA9P43362 315 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 MXI1P50539 228 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 GPC5P78333 572 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 MTMR2Q13614 643 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 CEP85LQ5SZL2 805 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.03■□□□□ -0
HMGCL-203ENST00000374490 HAUS6Q7Z4H7 955 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 USP37Q86T82 979 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 SYTL5Q8TDW5 730 aaPredicted RBP15.03■□□□□ -0
HMGCL-203ENST00000374490 RNPC3Q96LT9 517 aaKnown RBP15.03■□□□□ -0
HMGCL-203ENST00000374490 THAP2Q9H0W7 228 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 SAMM50Q9Y512 469 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 CTDP1Q9Y5B0 961 aaPredicted RBP15.03■□□□□ -0
HMGCL-203ENST00000374490 WDR64B1ANS9 1081 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 NFIBO00712 420 aa15.03■□□□□ -0
HMGCL-203ENST00000374490 YWHABP31946 246 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms