RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 MYL3P08590 195 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 ACTN1P12814 892 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 CCND3P30281 292 aaPredicted RBP17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 PSEN2P49810 448 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 VAMP7P51809 220 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 WNT7BP56706 349 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 POU5F1BQ06416 359 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 KIF22Q14807 665 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 MEA1Q16626 185 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 IFNLR1Q8IU57 520 aaPredicted RBP17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 OR8K1Q8NGG5 319 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 BICD1Q96G01 975 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 NLRP4Q96MN2 994 aa17.11■□□□□ 0.33
NIPAL3-204ENST00000374399 A0A0B4J269 797 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 ARHGAP6O43182 974 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 FAM189A1O60320 539 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 HOXC8P31273 242 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 CLCN1P35523 988 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 NLRP11P59045 1033 aaKnown RBP17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 ZBTB41Q5SVQ8 909 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 MAP3K21Q5TCX8 1036 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 ZPBP2Q6X784 338 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 GPD1LQ8N335 351 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 IQCDQ96DY2 449 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 CHP1Q99653 195 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 ACO2Q99798 780 aaKnown RBP17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 C2orf40Q9H1Z8 148 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 PLCB1Q9NQ66 1216 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 BRCA2P51587 3418 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 NRCAMQ92823 1304 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 A0A087WZ62 844 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 RRN3P2A6NIE6 340 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 ADAMTS4O75173 837 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 PRKCBP05771 671 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 TPM1P09493 284 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 PRKAR2AP13861 404 aaKnown RBP17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 PROZP22891 400 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 HNRNPH3P31942 346 aaKnown RBP17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 CYP24A1Q07973 514 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 TFDP1Q14186 410 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 AMHR2Q16671 573 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 EXOC3L4Q17RC7 722 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 TOGARAM2Q6ZUX3 1019 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 CCAR2Q8N163 923 aaKnown RBP17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 NEK11Q8NG66 645 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 LMO3Q8TAP4 145 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 PARD3BQ8TEW8 1205 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 FDXACB1Q9BRP7 624 aaPredicted RBP17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 NAA15Q9BXJ9 866 aaKnown RBP17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 EDEM3Q9BZQ6 932 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 PTPRHQ9HD43 1115 aa17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 AJAP1Q9UKB5 411 aaPredicted RBP17.1■□□□□ 0.33
NIPAL3-204ENST00000374399 LRRIQ3A6PVS8 624 aaPredicted RBP17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 B4GALT5O43286 388 aa17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 EXTL3O43909 919 aa17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 LRRN2O75325 713 aa17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 PGK1P00558 417 aa17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 C6orf222P0C671 652 aaPredicted RBP17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 KLHDC7AQ5VTJ3 777 aa17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 NFRKBQ6P4R8 1299 aa17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 GBP6Q6ZN66 633 aa17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 RUFY4Q6ZNE9 571 aa17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 ZBTB8OSQ8IWT0 167 aa17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 PPP1R16BQ96T49 567 aa17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 FAM213AQ9BRX8 229 aa17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 MRPL4Q9BYD3 311 aaKnown RBP17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 CEP72Q9P209 647 aa17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 AGO2Q9UKV8 859 aaKnown RBP17.09■□□□□ 0.33
NIPAL3-204ENST00000374399 RBAK-RBAKDNI3L0D1 243 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 ACKR2O00590 384 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 CSDE1O75534 798 aaKnown RBP17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 KRT13P13646 458 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 GPC3P51654 580 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 ZNF200P98182 395 aaPredicted RBP17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 MAPK6Q16659 721 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 SLFN12LQ6IEE8 588 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 PDXDC1Q6P996 788 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 TRIM65Q6PJ69 517 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 TMC2Q8TDI7 906 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 POP1Q99575 1024 aaKnown RBP17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 TMEM117Q9H0C3 514 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 ADAMTS10Q9H324 1103 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 GCNT4Q9P109 453 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 PLAGL2Q9UPG8 496 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 AKT3Q9Y243 479 aa17.08■□□□□ 0.32
NIPAL3-204ENST00000374399 LRRC53A6NM62 1247 aa17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 TOM1L1O75674 476 aa17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 TMOD1P28289 359 aa17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 GCLMP48507 274 aa17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 ACOT2P49753 483 aa17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 CHMP4BP1P59074 171 aa17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 POLR2FP61218 127 aaKnown RBP17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 CLDN10P78369 228 aa17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 FAM187BQ17R55 369 aa17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 EPC2Q52LR7 807 aa17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 EEF1DP3Q658K8 133 aa17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 CCSAPQ6IQ19 270 aaPredicted RBP17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 TSHZ1Q6ZSZ6 1077 aa17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 ZNF296Q8WUU4 475 aaPredicted RBP17.07■□□□□ 0.32
NIPAL3-204ENST00000374399 FAM84AQ96KN4 292 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms