RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 EXOC8Q8IYI6 725 aa18.33■□□□□ 0.53
PTPN20-203ENST00000374342 MNS1Q8NEH6 495 aa18.33■□□□□ 0.53
PTPN20-203ENST00000374342 NPLOC4Q8TAT6 608 aa18.33■□□□□ 0.53
PTPN20-203ENST00000374342 PARD3BQ8TEW8 1205 aa18.33■□□□□ 0.53
PTPN20-203ENST00000374342 AFG1LQ8WV93 481 aa18.33■□□□□ 0.53
PTPN20-203ENST00000374342 KCNN1Q92952 543 aa18.33■□□□□ 0.53
PTPN20-203ENST00000374342 MFSD14AQ96MC6 490 aa18.33■□□□□ 0.53
PTPN20-203ENST00000374342 TARS2Q9BW92 718 aaKnown RBP18.33■□□□□ 0.53
PTPN20-203ENST00000374342 STK33Q9BYT3 514 aa18.33■□□□□ 0.53
PTPN20-203ENST00000374342 BZW2Q9Y6E2 419 aaKnown RBP18.33■□□□□ 0.53
PTPN20-203ENST00000374342 A0A087X0T9 212 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 HBP1O60381 514 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 PIGRP01833 764 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 FAM228BP0C875 321 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 DLATP10515 647 aaKnown RBP18.33■□□□□ 0.52
PTPN20-203ENST00000374342 RFX1P22670 979 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 SOX5P35711 763 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 PRKCIP41743 596 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 NCBP1Q09161 790 aaKnown RBP18.33■□□□□ 0.52
PTPN20-203ENST00000374342 LAMTOR4Q0VGL1 99 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 MKRN4PQ13434 485 aaPredicted RBP18.33■□□□□ 0.52
PTPN20-203ENST00000374342 ARHGAP44Q17R89 818 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 PHLDB3Q6NSJ2 640 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 ZNF571Q7Z3V5 609 aaPredicted RBP18.33■□□□□ 0.52
PTPN20-203ENST00000374342 USP37Q86T82 979 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 TXLNBQ8N3L3 684 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 PPTC7Q8NI37 304 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 TMC2Q8TDI7 906 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 POP1Q99575 1024 aaKnown RBP18.33■□□□□ 0.52
PTPN20-203ENST00000374342 TINF2Q9BSI4 451 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 CARD6Q9BX69 1037 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 TMEM134Q9H6X4 195 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 LUC7LQ9NQ29 371 aaKnown RBP18.33■□□□□ 0.52
PTPN20-203ENST00000374342 ADAMTS1Q9UHI8 967 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 DAAM1Q9Y4D1 1078 aa18.33■□□□□ 0.52
PTPN20-203ENST00000374342 IGKV6-21A0A0C4DH24 114 aa18.32■□□□□ 0.52
PTPN20-203ENST00000374342 EXTL3O43909 919 aa18.32■□□□□ 0.52
PTPN20-203ENST00000374342 LRRN2O75325 713 aa18.32■□□□□ 0.52
PTPN20-203ENST00000374342 SRGAP2CP0DJJ0 459 aa18.32■□□□□ 0.52
PTPN20-203ENST00000374342 IGBP1P78318 339 aa18.32■□□□□ 0.52
PTPN20-203ENST00000374342 RGMBQ6NW40 437 aa18.32■□□□□ 0.52
PTPN20-203ENST00000374342 ARHGEF19Q8IW93 802 aa18.32■□□□□ 0.52
PTPN20-203ENST00000374342 ZBTB10Q96DT7 871 aa18.32■□□□□ 0.52
PTPN20-203ENST00000374342 ZBTB45Q96K62 511 aaPredicted RBP18.32■□□□□ 0.52
PTPN20-203ENST00000374342 JPH2Q9BR39 696 aaPredicted RBP18.32■□□□□ 0.52
PTPN20-203ENST00000374342 TMEM8AQ9HCN3 771 aa18.32■□□□□ 0.52
PTPN20-203ENST00000374342 AGO2Q9UKV8 859 aaKnown RBP18.32■□□□□ 0.52
PTPN20-203ENST00000374342 EVI5O60447 810 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 NLRP11P59045 1033 aaKnown RBP18.31■□□□□ 0.52
PTPN20-203ENST00000374342 MXD4Q14582 209 aaPredicted RBP18.31■□□□□ 0.52
PTPN20-203ENST00000374342 KRT39Q6A163 491 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 SAPCD2Q86UD0 394 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 RHPN2Q8IUC4 686 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 ZBTB8OSQ8IWT0 167 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 RNF149Q8NC42 400 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 EMID1Q96A84 441 aaPredicted RBP18.31■□□□□ 0.52
PTPN20-203ENST00000374342 MSTO1Q9BUK6 570 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 GPR88Q9GZN0 384 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 HAPLN2Q9GZV7 340 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 RNPEPQ9H4A4 650 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.31■□□□□ 0.52
PTPN20-203ENST00000374342 SLC5A4Q9NY91 659 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 SUCLA2Q9P2R7 463 aaPredicted RBP18.31■□□□□ 0.52
PTPN20-203ENST00000374342 STYXL1Q9Y6J8 313 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 MYH10P35580 1976 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 ZNF233A6NK53 670 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 PJA2O43164 708 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 HARSP12081 509 aaKnown RBP18.31■□□□□ 0.52
PTPN20-203ENST00000374342 SMPD1P17405 629 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 CLCN3P51790 818 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 EFNA5P52803 228 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 ACVR2BQ13705 512 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 CDCA2Q69YH5 1023 aaPredicted RBP18.31■□□□□ 0.52
PTPN20-203ENST00000374342 SLFN12LQ6IEE8 588 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 METTL13Q8N6R0 699 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 CCDC113Q9H0I3 377 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 ABHD16BQ9H3Z7 469 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 KIAA1586Q9HCI6 787 aa18.31■□□□□ 0.52
PTPN20-203ENST00000374342 KIAA0391O15091 583 aaKnown RBP18.3■□□□□ 0.52
PTPN20-203ENST00000374342 PMM2O15305 246 aa18.3■□□□□ 0.52
PTPN20-203ENST00000374342 MOCS3O95396 460 aa18.3■□□□□ 0.52
PTPN20-203ENST00000374342 C22orf31O95567 290 aa18.3■□□□□ 0.52
PTPN20-203ENST00000374342 GJB1P08034 283 aa18.3■□□□□ 0.52
PTPN20-203ENST00000374342 ACOT2P49753 483 aa18.3■□□□□ 0.52
PTPN20-203ENST00000374342 MCCD1P59942 119 aaPredicted RBP18.3■□□□□ 0.52
PTPN20-203ENST00000374342 VPS36Q86VN1 386 aa18.3■□□□□ 0.52
PTPN20-203ENST00000374342 ZNF668Q96K58 619 aaPredicted RBP18.3■□□□□ 0.52
PTPN20-203ENST00000374342 NLRP4Q96MN2 994 aa18.3■□□□□ 0.52
PTPN20-203ENST00000374342 ZCCHC17Q9NP64 241 aaKnown RBP18.3■□□□□ 0.52
PTPN20-203ENST00000374342 UBE2TQ9NPD8 197 aaPredicted RBP18.3■□□□□ 0.52
PTPN20-203ENST00000374342 CAPN6Q9Y6Q1 641 aa18.3■□□□□ 0.52
PTPN20-203ENST00000374342 MGAMO43451 1857 aa18.3■□□□□ 0.52
PTPN20-203ENST00000374342 ENC1O14682 589 aa18.29■□□□□ 0.52
PTPN20-203ENST00000374342 TACC1O75410 805 aa18.29■□□□□ 0.52
PTPN20-203ENST00000374342 PRKCBP05771 671 aa18.29■□□□□ 0.52
PTPN20-203ENST00000374342 SLC10A3P09131 477 aa18.29■□□□□ 0.52
PTPN20-203ENST00000374342 INSRRP14616 1297 aa18.29■□□□□ 0.52
PTPN20-203ENST00000374342 RBM10P98175 930 aaKnown RBP18.29■□□□□ 0.52
PTPN20-203ENST00000374342 ELF2Q15723 593 aa18.29■□□□□ 0.52
PTPN20-203ENST00000374342 DUSP28Q4G0W2 176 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms