RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 BRI3BPQ8WY22 251 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 SHC3Q92529 594 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 UBXN6Q9BZV1 441 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 ABCB6Q9NP58 842 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 TSKSQ9UJT2 592 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 NOCTQ9UK39 431 aaKnown RBP13.65□□□□□ -0.22
PRPF4-202ENST00000374199 BTBD19C9JJ37 291 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 KRT13P13646 458 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 STAT5BP51692 787 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 ARHGAP1Q07960 439 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 DRAP1Q14919 205 aaPredicted RBP13.65□□□□□ -0.22
PRPF4-202ENST00000374199 LY6KQ17RY6 165 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 ZPBP2Q6X784 338 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 MAEAQ7L5Y9 396 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 ARHGEF19Q8IW93 802 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 SEMA4DQ92854 862 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 PTPRHQ9HD43 1115 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 VTA1Q9NP79 307 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 CNTN6Q9UQ52 1028 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 CNTNAP2Q9UHC6 1331 aa13.65□□□□□ -0.22
PRPF4-202ENST00000374199 BHMG1C9JSJ3 638 aaPredicted RBP13.64□□□□□ -0.23
PRPF4-202ENST00000374199 ATP8B1O43520 1251 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 STRNO43815 780 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 ADCY3O60266 1144 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 GGPS1O95749 300 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 POTEJP0CG39 1038 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 KLRC1P26715 233 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 RBM10P98175 930 aaKnown RBP13.64□□□□□ -0.23
PRPF4-202ENST00000374199 CAPSQ13938 189 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 PDCD11Q14690 1871 aaKnown RBP13.64□□□□□ -0.23
PRPF4-202ENST00000374199 PLCB4Q15147 1175 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 GPRC5AQ8NFJ5 357 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 NRBP2Q9NSY0 501 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 TARSL2A2RTX5 802 aaKnown RBP13.64□□□□□ -0.23
PRPF4-202ENST00000374199 MSCO60682 206 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 TACC1O75410 805 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 MTA2O94776 668 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 PGK2P07205 417 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 HSDL1Q3SXM5 330 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 KRT39Q6A163 491 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 IFT74Q96LB3 600 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 KREMEN1Q96MU8 473 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 NOX5Q96PH1 765 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 ISCUQ9H1K1 167 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 LUC7LQ9NQ29 371 aaKnown RBP13.64□□□□□ -0.23
PRPF4-202ENST00000374199 HDAC6Q9UBN7 1215 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 COL1A2P08123 1366 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 GRID2IPA4D2P6 1211 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 MOCS3O95396 460 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 GCNT1Q02742 428 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 KCTD2Q14681 263 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 ZNF516Q92618 1163 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 CCDC94Q9BW85 323 aaPredicted RBP13.64□□□□□ -0.23
PRPF4-202ENST00000374199 PACSIN1Q9BY11 444 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 PCIF1Q9H4Z3 704 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 ADAMTS1Q9UHI8 967 aa13.64□□□□□ -0.23
PRPF4-202ENST00000374199 C4BPAP04003 597 aaKnown RBP13.63□□□□□ -0.23
PRPF4-202ENST00000374199 POU5F1Q01860 360 aaKnown RBP13.63□□□□□ -0.23
PRPF4-202ENST00000374199 TCERG1LQ5VWI1 586 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 IER5Q5VY09 327 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 SPRYD7Q5W111 196 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 MMGT1Q8N4V1 131 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 UBR7Q8N806 425 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 MNS1Q8NEH6 495 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 DDX1Q92499 740 aaKnown RBP13.63□□□□□ -0.23
PRPF4-202ENST00000374199 UBXN4Q92575 508 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 ZMYND15Q9H091 742 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 DEF6Q9H4E7 631 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 RNF14Q9UBS8 474 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 TMEM59LQ9UK28 342 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 PDHXO00330 501 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 PDE2AO00408 941 aaPredicted RBP13.63□□□□□ -0.23
PRPF4-202ENST00000374199 TFRCP02786 760 aaKnown RBP13.63□□□□□ -0.23
PRPF4-202ENST00000374199 TUBBP07437 444 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 TMEM253P0C7T8 217 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 CLCN6P51797 869 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 POLGP54098 1239 aaPredicted RBP13.63□□□□□ -0.23
PRPF4-202ENST00000374199 FAM187BQ17R55 369 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 MTERF2Q49AM1 385 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 SLC10A4Q96EP9 437 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 FAM81BQ96LP2 452 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 CCDC43Q96MW1 224 aaKnown RBP13.63□□□□□ -0.23
PRPF4-202ENST00000374199 SPAG5Q96R06 1193 aa13.63□□□□□ -0.23
PRPF4-202ENST00000374199 MXI1P50539 228 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 PRPF4BQ13523 1007 aaKnown RBP13.62□□□□□ -0.23
PRPF4-202ENST00000374199 ZACNQ401N2 412 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 SLFN12LQ6IEE8 588 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 ARMCX2Q7L311 632 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 PPTC7Q8NI37 304 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 DHX38Q92620 1227 aaKnown RBP13.62□□□□□ -0.23
PRPF4-202ENST00000374199 PKNOX2Q96KN3 472 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 PTPN18Q99952 460 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 PAGR1Q9BTK6 254 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 CCDC169A6NNP5 214 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 CCDC172P0C7W6 258 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 CHRNB2P17787 502 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 TCP1P17987 556 aaKnown RBP13.62□□□□□ -0.23
PRPF4-202ENST00000374199 EFNA5P52803 228 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 WNT7BP56706 349 aa13.62□□□□□ -0.23
PRPF4-202ENST00000374199 ALKBH5Q6P6C2 394 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms