RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 HP1BP3Q5SSJ5 553 aaPredicted RBP18.56■□□□□ 0.56
PTPRU-202ENST00000373779 FAF2Q96CS3 445 aa18.56■□□□□ 0.56
PTPRU-202ENST00000373779 NCAPGQ9BPX3 1015 aa18.56■□□□□ 0.56
PTPRU-202ENST00000373779 MED10Q9BTT4 135 aa18.56■□□□□ 0.56
PTPRU-202ENST00000373779 TRAIPQ9BWF2 469 aa18.56■□□□□ 0.56
PTPRU-202ENST00000373779 HSPBP1Q9NZL4 362 aa18.56■□□□□ 0.56
PTPRU-202ENST00000373779 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.56■□□□□ 0.56
PTPRU-202ENST00000373779 LRRC10BA6NIK2 292 aa18.56■□□□□ 0.56
PTPRU-202ENST00000373779 CLDN3O15551 220 aa18.56■□□□□ 0.56
PTPRU-202ENST00000373779 SFNP31947 248 aa18.56■□□□□ 0.56
PTPRU-202ENST00000373779 ZC2HC1CQ53FD0 456 aaPredicted RBP18.56■□□□□ 0.56
PTPRU-202ENST00000373779 ZNF394Q53GI3 561 aa18.56■□□□□ 0.56
PTPRU-202ENST00000373779 MKNK1Q9BUB5 465 aa18.56■□□□□ 0.56
PTPRU-202ENST00000373779 TMBIM4Q9HC24 238 aa18.56■□□□□ 0.56
PTPRU-202ENST00000373779 FGFR1OP2Q9NVK5 253 aa18.56■□□□□ 0.56
PTPRU-202ENST00000373779 GIPC1O14908 333 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 FOXP2O15409 715 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 PDIA2Q13087 525 aaKnown RBP18.55■□□□□ 0.56
PTPRU-202ENST00000373779 GPR75-ASB3A0A0A6YYF3 556 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 A0A0U1RQJ8 604 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 CYP11B2P19099 503 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 ITIH2P19823 946 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 SCP2P22307 547 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 OSTNP61366 133 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 MRPS9P82933 396 aaKnown RBP18.55■□□□□ 0.56
PTPRU-202ENST00000373779 TRIM72Q6ZMU5 477 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 CATSPER3Q86XQ3 398 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 LINC00116Q8NCU8 138 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 STOML1Q9UBI4 398 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 ALG6Q9Y672 507 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 UBE4BO95155 1302 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 PSMC5P62195 406 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 C3orf20Q8ND61 904 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 DEPDC1BQ8WUY9 529 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 TBXAS1P24557 533 aaPredicted RBP18.55■□□□□ 0.56
PTPRU-202ENST00000373779 AARSP49588 968 aaKnown RBP eCLIP18.55■□□□□ 0.56
PTPRU-202ENST00000373779 TMPRSS15P98073 1019 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 INTS5Q6P9B9 1019 aaKnown RBP18.55■□□□□ 0.56
PTPRU-202ENST00000373779 TRPM8Q7Z2W7 1104 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 DCTN4Q9UJW0 460 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 JCADQ9P266 1359 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 SYNJ2BP-COX16A0A087WUM0 186 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 CLGNO14967 610 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 PON1P27169 355 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 MEA1Q16626 185 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 MEI1Q5TIA1 1274 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 CRLF3Q8IUI8 442 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 SP8Q8IXZ3 490 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 KIAA0895Q8NCT3 520 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 SIGLEC1Q9BZZ2 1709 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 KCND2Q9NZV8 630 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 COX16Q9P0S2 106 aa18.55■□□□□ 0.56
PTPRU-202ENST00000373779 CCT8L1PA6NM43 557 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 ECE2O60344 883 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 PPP2R5CQ13362 524 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 SH2D4BQ5SQS7 431 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 GPD1LQ8N335 351 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 MARCH10Q8NA82 808 aaPredicted RBP18.54■□□□□ 0.56
PTPRU-202ENST00000373779 DUSP9Q99956 384 aaKnown RBP18.54■□□□□ 0.56
PTPRU-202ENST00000373779 CARD9Q9H257 536 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 NYAP2Q9P242 653 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 GLI1P08151 1106 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 COMTP21964 271 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 CDR2Q01850 454 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 SEPT6Q14141 434 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 EXOC8Q8IYI6 725 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 RAVER2Q9HCJ3 691 aaKnown RBP18.54■□□□□ 0.56
PTPRU-202ENST00000373779 PPARGC1AQ9UBK2 798 aaKnown RBP18.54■□□□□ 0.56
PTPRU-202ENST00000373779 CSADQ9Y600 493 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 ECE1P42892 770 aa18.54■□□□□ 0.56
PTPRU-202ENST00000373779 PLCB4Q15147 1175 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 ACTRT1Q8TDG2 376 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 AENQ8WTP8 325 aaKnown RBP18.53■□□□□ 0.56
PTPRU-202ENST00000373779 DDX23Q9BUQ8 820 aaKnown RBP18.53■□□□□ 0.56
PTPRU-202ENST00000373779 ROPN1BQ9BZX4 212 aaPredicted RBP18.53■□□□□ 0.56
PTPRU-202ENST00000373779 ROPN1Q9HAT0 212 aaPredicted RBP18.53■□□□□ 0.56
PTPRU-202ENST00000373779 MON2Q7Z3U7 1717 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 SPECC1L-ADORA2AF8WAN1 911 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 DBN1Q16643 649 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 SLC30A5Q8TAD4 765 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 STRIP2Q9ULQ0 834 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 C3P01024 1663 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 CDH16O75309 829 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 SLC29A2Q14542 456 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 MDM1Q8TC05 714 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 NSMCE1Q8WV22 266 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 MTMR8Q96EF0 704 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 NDUFB10O96000 172 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 ZC3H18Q86VM9 953 aaKnown RBP18.53■□□□□ 0.56
PTPRU-202ENST00000373779 ATP11CQ8NB49 1132 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 HEXIM2Q96MH2 286 aaKnown RBP18.53■□□□□ 0.56
PTPRU-202ENST00000373779 KLC2Q9H0B6 622 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 SENP1Q9P0U3 644 aa18.53■□□□□ 0.56
PTPRU-202ENST00000373779 COPB2P35606 906 aa18.52■□□□□ 0.56
PTPRU-202ENST00000373779 POLE2P56282 527 aa18.52■□□□□ 0.56
PTPRU-202ENST00000373779 RC3H1Q5TC82 1133 aaKnown RBP18.52■□□□□ 0.56
PTPRU-202ENST00000373779 RAPH1Q70E73 1250 aa18.52■□□□□ 0.56
PTPRU-202ENST00000373779 VGLL2Q8N8G2 317 aa18.52■□□□□ 0.56
PTPRU-202ENST00000373779 ARL4AP40617 200 aa18.52■□□□□ 0.56
PTPRU-202ENST00000373779 ARSEP51690 589 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms