RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 ALKBH5Q6P6C2 394 aaKnown RBP6.93□□□□□ -1.3
CHD6-202ENST00000373222 ZNF572Q7Z3I7 529 aaPredicted RBP6.93□□□□□ -1.3
CHD6-202ENST00000373222 CPNE8Q86YQ8 564 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 GMCL1P1Q8NEA9 526 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 OR2W6PQ8NHA6 318 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 LNX1Q8TBB1 728 aaPredicted RBP6.93□□□□□ -1.3
CHD6-202ENST00000373222 GMCL1Q96IK5 515 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 RPGRIP1Q96KN7 1286 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 DDX47Q9H0S4 455 aaKnown RBP6.93□□□□□ -1.3
CHD6-202ENST00000373222 NEUROG2Q9H2A3 272 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 UNC45AQ9H3U1 944 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 MED4Q9NPJ6 270 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 HOMER2Q9NSB8 354 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 FER1L6Q2WGJ9 1857 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 C10orf71Q711Q0 1435 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 H0YIN7 160 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 PSMD10O75832 226 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 CALCAP01258 141 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 CYP3A4P08684 503 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 ZBTB48P10074 688 aaPredicted RBP6.93□□□□□ -1.3
CHD6-202ENST00000373222 FDX1P10109 184 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 PAFAH1B1P43034 410 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 SPP2Q13103 211 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 LLGL1Q15334 1064 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 ARHGAP44Q17R89 818 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 C1orf186Q6ZWK4 172 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 DAW1Q8N136 415 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 ZNF454Q8N9F8 522 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 LRRC57Q8N9N7 239 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 GOLGA5Q8TBA6 731 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 U2AF1L4Q8WU68 220 aaKnown RBP6.93□□□□□ -1.3
CHD6-202ENST00000373222 BORCS6Q96GS4 357 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 CCDC43Q96MW1 224 aaKnown RBP6.93□□□□□ -1.3
CHD6-202ENST00000373222 CELF4Q9BZC1 486 aaKnown RBP6.93□□□□□ -1.3
CHD6-202ENST00000373222 GPR88Q9GZN0 384 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 VIPAS39Q9H9C1 493 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 ZNF277Q9NRM2 450 aaPredicted RBP6.93□□□□□ -1.3
CHD6-202ENST00000373222 PSD3Q9NYI0 1048 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 RABGEF1Q9UJ41 708 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 FZD1Q9UP38 647 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 TELO2Q9Y4R8 837 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 CNTNAP1P78357 1384 aa6.93□□□□□ -1.3
CHD6-202ENST00000373222 GOLGA6CA6NDK9 693 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 ZNF233A6NK53 670 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 TULP2O00295 520 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 NFIBO00712 420 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 PDXKO00764 312 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 CEP104O60308 925 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 EYA4O95677 639 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 EGFRP00533 1210 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 CTSHP09668 335 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 GOLGA6DP0CG33 693 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 PRLRP16471 622 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 CIITAP33076 1130 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 MMP14P50281 582 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 JAM2P57087 298 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 ERVK-9P63128 1117 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 CFAP221Q4G0U5 840 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 MUM1L1Q5H9M0 696 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 METTL13Q8N6R0 699 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 ERMNQ8TAM6 284 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 C7orf43Q8WVR3 580 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 KAT5Q92993 513 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 ARHGEF26Q96DR7 871 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 HOOK2Q96ED9 719 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 NAP1L4Q99733 375 aaKnown RBP6.92□□□□□ -1.3
CHD6-202ENST00000373222 WDR11Q9BZH6 1224 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 GOLGA6AQ9NYA3 693 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 SCINQ9Y6U3 715 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 KIAA1217Q5T5P2 1943 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 FAM221BA6H8Z2 402 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 MYO1CO00159 1063 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 GAS7O60861 476 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 FAM13AO94988 1023 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 GNA14O95837 355 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 IGHA2P01877 340 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 ITGB5P18084 799 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 ECHS1P30084 290 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 INPP5BP32019 993 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 GJA8P48165 433 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 CDKN1CP49918 316 aaPredicted RBP6.92□□□□□ -1.3
CHD6-202ENST00000373222 SOX10P56693 466 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 TUBB4BP68371 445 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 PDCLQ13371 301 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 UBAP2Q5T6F2 1119 aaKnown RBP6.92□□□□□ -1.3
CHD6-202ENST00000373222 DCAF12L1Q5VU92 463 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 LEKR1Q6ZMV7 388 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 FRMD5Q7Z6J6 570 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 FAM186BQ8IYM0 893 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 CPXCR1Q8N123 301 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 RNF10Q8N5U6 811 aaKnown RBP6.92□□□□□ -1.3
CHD6-202ENST00000373222 MSL3Q8N5Y2 521 aaKnown RBP6.92□□□□□ -1.3
CHD6-202ENST00000373222 USP38Q8NB14 1042 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 CXorf38Q8TB03 319 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 SLC20A1Q8WUM9 679 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 SYN2Q92777 582 aaPredicted RBP6.92□□□□□ -1.3
CHD6-202ENST00000373222 IQCDQ96DY2 449 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 FAM20AQ96MK3 541 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 LXNQ9BS40 222 aa6.92□□□□□ -1.3
CHD6-202ENST00000373222 FAM126AQ9BYI3 521 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms