RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 CETN1Q12798 172 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 AOC3Q16853 763 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 KAT5Q92993 513 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 ACCSQ96QU6 501 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 CNOT7Q9UIV1 285 aaKnown RBP13.74□□□□□ -0.21
CTPS1-202ENST00000372621 PNMA2Q9UL42 364 aa13.74□□□□□ -0.21
CTPS1-202ENST00000372621 SGPL1O95470 568 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 PLS3P13797 630 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 MMP13P45452 471 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 GTF2A1P52655 376 aaPredicted RBP13.73□□□□□ -0.21
CTPS1-202ENST00000372621 GTF2BQ00403 316 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 SPRED3Q2MJR0 410 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 MEX3CQ5U5Q3 659 aaKnown RBP13.73□□□□□ -0.21
CTPS1-202ENST00000372621 NOP9Q86U38 636 aaKnown RBP13.73□□□□□ -0.21
CTPS1-202ENST00000372621 LDHDQ86WU2 507 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 MDM1Q8TC05 714 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 MORC4Q8TE76 937 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 CABS1Q96KC9 395 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 TMEM117Q9H0C3 514 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 ST6GALNAC4Q9H4F1 302 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 KCNH7Q9NS40 1196 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 HSPBP1Q9NZL4 362 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 ZHX2Q9Y6X8 837 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 PODXLO00592 558 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 RASSF9O75901 435 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 P4HBP07237 508 aaKnown RBP13.73□□□□□ -0.21
CTPS1-202ENST00000372621 RARRES1P49788 294 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 SMTNP53814 917 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 SIX1Q15475 284 aaPredicted RBP13.73□□□□□ -0.21
CTPS1-202ENST00000372621 STYK1Q6J9G0 422 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 ZNF746Q6NUN9 644 aaPredicted RBP13.73□□□□□ -0.21
CTPS1-202ENST00000372621 XXYLT1Q8NBI6 393 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 XPO6Q96QU8 1125 aaKnown RBP13.73□□□□□ -0.21
CTPS1-202ENST00000372621 FAM129AQ9BZQ8 928 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 WNT8AQ9H1J5 351 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 YDJCA8MPS7 323 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 DDX39AO00148 427 aaKnown RBP13.73□□□□□ -0.21
CTPS1-202ENST00000372621 BACH1O14867 736 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 PYGMP11217 842 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 GBP1P32455 592 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 SLC29A2Q14542 456 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 GRIPAP1Q4V328 841 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 TNFAIP8L3Q5GJ75 292 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 UBAP2Q5T6F2 1119 aaKnown RBP13.73□□□□□ -0.21
CTPS1-202ENST00000372621 DENND2CQ68D51 928 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 MAEAQ7L5Y9 396 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 MIER3Q7Z3K6 550 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 KREMEN1Q96MU8 473 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 ZNF317Q96PQ6 595 aaPredicted RBP13.73□□□□□ -0.21
CTPS1-202ENST00000372621 TMEM109Q9BVC6 243 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 COL20A1Q9P218 1284 aa13.73□□□□□ -0.21
CTPS1-202ENST00000372621 CHORDC1Q9UHD1 332 aaPredicted RBP13.73□□□□□ -0.21
CTPS1-202ENST00000372621 PHF20L1A8MW92 1017 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 CCDC137Q6PK04 289 aaKnown RBP13.72□□□□□ -0.21
CTPS1-202ENST00000372621 FAM160B2Q86V87 743 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 C7orf43Q8WVR3 580 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 SEMA4AQ9H3S1 761 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 ACTR5Q9H9F9 607 aaPredicted RBP13.72□□□□□ -0.21
CTPS1-202ENST00000372621 TRPC6Q9Y210 931 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 RGPD3A6NKT7 1758 aaPredicted RBP13.72□□□□□ -0.21
CTPS1-202ENST00000372621 RGPD4Q7Z3J3 1758 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 TCRBV7S2A1N4TA0A589 114 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 CCDC169A6NNP5 214 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 TCP10L2B9ZVM9 353 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 H0YHG0 523 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 DNM1LO00429 736 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 CYP1A2P05177 515 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 USP8P40818 1118 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 SNRPFP62306 86 aaKnown RBP13.72□□□□□ -0.21
CTPS1-202ENST00000372621 MESDQ14696 234 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 LACTB2Q53H82 288 aaPredicted RBP13.72□□□□□ -0.21
CTPS1-202ENST00000372621 ANKRD20A8PQ5CZ79 823 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 CCDC121Q6ZUS5 278 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 NIPA1Q7RTP0 329 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 ATXN2LQ8WWM7 1075 aaKnown RBP13.72□□□□□ -0.21
CTPS1-202ENST00000372621 CHMP6Q96FZ7 201 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 FBXO28Q9NVF7 368 aa13.72□□□□□ -0.21
CTPS1-202ENST00000372621 TMEM110-MUSTN1A8MSY1 372 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 ATMINO43313 823 aaPredicted RBP13.71□□□□□ -0.21
CTPS1-202ENST00000372621 LYPLA2O95372 231 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 HMGB2P26583 209 aaKnown RBP13.71□□□□□ -0.21
CTPS1-202ENST00000372621 FMO1Q01740 532 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 ZNF568Q3ZCX4 644 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 CHADLQ6NUI6 762 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 SLC47A2Q86VL8 602 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 CPNE8Q86YQ8 564 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 CACNA2D3Q8IZS8 1091 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 SHC3Q92529 594 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 ART4Q93070 314 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.71□□□□□ -0.21
CTPS1-202ENST00000372621 PARP2Q9UGN5 583 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 FEM1BQ9UK73 627 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 ZNF536O15090 1300 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 CNTNAP1P78357 1384 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 ADRB2P07550 413 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 SPDYE6P0CI01 402 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 COILP38432 576 aaPredicted RBP13.71□□□□□ -0.21
CTPS1-202ENST00000372621 PTGER2P43116 358 aa13.71□□□□□ -0.21
CTPS1-202ENST00000372621 MXI1P50539 228 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms