RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 ERP27Q96DN0 273 aa16.17■□□□□ 0.18
GTF3C4-201ENST00000372146 IFT43Q96FT9 208 aa16.17■□□□□ 0.18
GTF3C4-201ENST00000372146 OLFM1Q99784 485 aa16.17■□□□□ 0.18
GTF3C4-201ENST00000372146 CYP26B1Q9NR63 512 aa16.17■□□□□ 0.18
GTF3C4-201ENST00000372146 CYP4A11Q02928 519 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 PDIA2Q13087 525 aaKnown RBP16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 SKAP2O75563 359 aaPredicted RBP16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 PAX7P23759 505 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 TFAMQ00059 246 aaKnown RBP16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 KCTD17Q8N5Z5 321 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 IL1RL2Q9HB29 575 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 SPDYE5A6NIY4 337 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 CLASP2O75122 1294 aaKnown RBP16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 CD58P19256 250 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 CENPAP49450 140 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 SPDYE7PQ495Y7 208 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 RHOT2Q8IXI1 618 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 HEMGNQ9BXL5 484 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 GRID2IPA4D2P6 1211 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 TSHZ1Q6ZSZ6 1077 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 CYP19A1P11511 503 aaPredicted RBP16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 SHROOM1Q2M3G4 852 aaPredicted RBP16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 PDCD6IPQ8WUM4 868 aaKnown RBP16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 SEPT1Q8WYJ6 367 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 EPS8L2Q9H6S3 715 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 MAPKBP1O60336 1514 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 PSMA4P25789 261 aaKnown RBP16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 C7orf31Q8N865 590 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 RUBCNQ92622 972 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 CDYLQ9Y232 598 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 PSTPIP1O43586 416 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 CORO7P57737 925 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 ARF5P84085 180 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 TINF2Q9BSI4 451 aa16.16■□□□□ 0.18
GTF3C4-201ENST00000372146 ITGA6P23229 1130 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 ZSWIM7Q19AV6 140 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 TEKT3Q9BXF9 490 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 EPC1Q9H2F5 836 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 DKK3Q9UBP4 350 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 PCDHGA3Q9Y5H0 932 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 FKBP9O95302 570 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 CLPTM1O96005 669 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 FKBP9P1Q75LS8 142 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 P3H2Q8IVL5 708 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 PPP6R2O75170 966 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 TGFBRAP1Q8WUH2 860 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 KCNK16Q96T55 309 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 BTBD7Q9P203 1132 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 TRIM43BA6NCK2 446 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 BCAP31P51572 246 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 FKBP3Q00688 224 aaKnown RBP16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 PDAP1Q13442 181 aaKnown RBP16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 ARID5BQ14865 1188 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 MICALL2Q8IY33 904 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 AFF4Q9UHB7 1163 aaKnown RBP16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 MYH15Q9Y2K3 1946 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 RECQLP46063 649 aaPredicted RBP16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 LRRC41Q15345 812 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 MIEF2Q96C03 454 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 EYA3Q99504 573 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 CFAP43Q8NDM7 1665 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 C1orf232A0A0U1RR37 186 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 LAD1O00515 517 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 S100A6P06703 90 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 TALDO1P37837 337 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 SCARA5Q6ZMJ2 495 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 KBTBD3Q8NAB2 608 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 HEXIM2Q96MH2 286 aaKnown RBP16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 DSCC1Q9BVC3 393 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 PCIF1Q9H4Z3 704 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 ATP8A2Q9NTI2 1148 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 RIMS2Q9UQ26 1411 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 ATP11CQ8NB49 1132 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 RSPH1Q8WYR4 309 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 CEP44Q9C0F1 390 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 MLXIPQ9HAP2 919 aa16.15■□□□□ 0.18
GTF3C4-201ENST00000372146 NCF4Q15080 339 aa16.14■□□□□ 0.18
GTF3C4-201ENST00000372146 ADGRA3Q8IWK6 1321 aa16.14■□□□□ 0.18
GTF3C4-201ENST00000372146 C6orf10Q5SRN2 563 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 NUP85Q9BW27 656 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 A0A1W2PQ27 194 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 A0A1W2PQ64 194 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 A0A1W2PQD8 194 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 CAPZA2P47755 286 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 SH2D3CQ8N5H7 860 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 ADAM30Q9UKF2 790 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 BNIP3LO60238 219 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 PPARAQ07869 468 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 CCDC137Q6PK04 289 aaKnown RBP16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 RBM41Q96IZ5 413 aaKnown RBP16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 KLHL4Q9C0H6 718 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 KRT84Q9NSB2 600 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 PPP1R37O75864 691 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 HSPA2P54652 639 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 SPATA5Q8NB90 893 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 ENKURQ8TC29 256 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 SERHL2Q9H4I8 314 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 SERHLQ9NQF3 203 aa16.14■□□□□ 0.17
GTF3C4-201ENST00000372146 DGKIO75912 1065 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms