RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 MATR3P43243 847 aaKnown RBP eCLIP15.11■□□□□ 0.01
SSR4-202ENST00000370085 RABGGTBP53611 331 aa15.11■□□□□ 0.01
SSR4-202ENST00000370085 HTRA4P83105 476 aaPredicted RBP15.11■□□□□ 0.01
SSR4-202ENST00000370085 FAM109BQ6ICB4 259 aaPredicted RBP15.11■□□□□ 0.01
SSR4-202ENST00000370085 GLB1LQ6UWU2 654 aa15.11■□□□□ 0.01
SSR4-202ENST00000370085 ZPBP2Q6X784 338 aa15.11■□□□□ 0.01
SSR4-202ENST00000370085 TIGD1Q96MW7 591 aa15.11■□□□□ 0.01
SSR4-202ENST00000370085 EXOC1Q9NV70 894 aa15.11■□□□□ 0.01
SSR4-202ENST00000370085 TBX20Q9UMR3 447 aa15.11■□□□□ 0.01
SSR4-202ENST00000370085 TNFSF13BQ9Y275 285 aa15.11■□□□□ 0.01
SSR4-202ENST00000370085 RWDD3Q9Y3V2 267 aa15.11■□□□□ 0.01
SSR4-202ENST00000370085 LAMA3Q16787 3333 aa15.11■□□□□ 0.01
SSR4-202ENST00000370085 GBF1Q92538 1859 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 PTPRSQ13332 1948 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 CARNS1A5YM72 827 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 PRPF40AO75400 957 aaKnown RBP15.1■□□□□ 0.01
SSR4-202ENST00000370085 DGKIO75912 1065 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 NPTXRO95502 500 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 ITGA4P13612 1032 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 LIG4P49917 911 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 GTF2BQ00403 316 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 COASYQ13057 564 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 BTG3Q14201 252 aaPredicted RBP15.1■□□□□ 0.01
SSR4-202ENST00000370085 ZNF568Q3ZCX4 644 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 ZNF697Q5TEC3 545 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 PPP2R2DQ66LE6 453 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 ZNF720Q7Z2F6 126 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 CMTR2Q8IYT2 770 aaKnown RBP15.1■□□□□ 0.01
SSR4-202ENST00000370085 FMR1NBQ8N0W7 255 aaPredicted RBP15.1■□□□□ 0.01
SSR4-202ENST00000370085 FIBCD1Q8N539 461 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 ACCSQ96QU6 501 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 ACO2Q99798 780 aaKnown RBP15.1■□□□□ 0.01
SSR4-202ENST00000370085 MRPL9Q9BYD2 267 aaKnown RBP15.1■□□□□ 0.01
SSR4-202ENST00000370085 TMEM117Q9H0C3 514 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 BLZF1Q9H2G9 400 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 PDZD7Q9H5P4 517 aa15.1■□□□□ 0.01
SSR4-202ENST00000370085 CLDN3O15551 220 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 TOM1L1O75674 476 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 KIF20AO95235 890 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 SMC2O95347 1197 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 CA3P07451 260 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 NMT1P30419 496 aaKnown RBP15.09■□□□□ 0.01
SSR4-202ENST00000370085 PSMD2Q13200 908 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 CUL4BQ13620 913 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 KYAT1Q16773 422 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 FAM26FQ5R3K3 315 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 MPZL3Q6UWV2 235 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 TMCO2Q7Z6W1 182 aaPredicted RBP15.09■□□□□ 0.01
SSR4-202ENST00000370085 MAP4K3Q8IVH8 894 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 SYCP3Q8IZU3 236 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 URGCPQ8TCY9 931 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 SAMD11Q96NU1 681 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 TARS2Q9BW92 718 aaKnown RBP15.09■□□□□ 0.01
SSR4-202ENST00000370085 GTPBP4Q9BZE4 634 aaKnown RBP15.09■□□□□ 0.01
SSR4-202ENST00000370085 TMEM206Q9H813 350 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 RMND1Q9NWS8 449 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 TBC1D7Q9P0N9 293 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 KANSL3Q9P2N6 904 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 IPPQ9Y573 584 aa15.09■□□□□ 0.01
SSR4-202ENST00000370085 TBKBP1A7MCY6 615 aa15.08■□□□□ 0
SSR4-202ENST00000370085 EIF3DO15371 548 aaKnown RBP eCLIP15.08■□□□□ 0
SSR4-202ENST00000370085 MCF2P10911 925 aa15.08■□□□□ 0
SSR4-202ENST00000370085 PBX2P40425 430 aa15.08■□□□□ 0
SSR4-202ENST00000370085 POSTNQ15063 836 aa15.08■□□□□ 0
SSR4-202ENST00000370085 UBXN11Q5T124 520 aa15.08■□□□□ 0
SSR4-202ENST00000370085 SPOUT1Q5T280 376 aaKnown RBP15.08■□□□□ 0
SSR4-202ENST00000370085 L1TD1Q5T7N2 865 aaKnown RBP15.08■□□□□ 0
SSR4-202ENST00000370085 NT5DC1Q5TFE4 455 aa15.08■□□□□ 0
SSR4-202ENST00000370085 SLFN12LQ6IEE8 588 aa15.08■□□□□ 0
SSR4-202ENST00000370085 TAS1R3Q7RTX0 852 aa15.08■□□□□ 0
SSR4-202ENST00000370085 MRPL10Q7Z7H8 261 aaKnown RBP15.08■□□□□ 0
SSR4-202ENST00000370085 ZNF598Q86UK7 904 aaKnown RBP15.08■□□□□ 0
SSR4-202ENST00000370085 GRAMD1CQ8IYS0 662 aa15.08■□□□□ 0
SSR4-202ENST00000370085 CRIPAKQ8N1N5 446 aa15.08■□□□□ 0
SSR4-202ENST00000370085 ENGASEQ8NFI3 743 aa15.08■□□□□ 0
SSR4-202ENST00000370085 SP7Q8TDD2 431 aaPredicted RBP15.08■□□□□ 0
SSR4-202ENST00000370085 ZNF689Q96CS4 500 aaPredicted RBP15.08■□□□□ 0
SSR4-202ENST00000370085 CCDC94Q9BW85 323 aaPredicted RBP15.08■□□□□ 0
SSR4-202ENST00000370085 EIF2AQ9BY44 585 aaKnown RBP15.08■□□□□ 0
SSR4-202ENST00000370085 NKX2-4Q9H2Z4 354 aa15.08■□□□□ 0
SSR4-202ENST00000370085 RSAD1Q9HA92 442 aa15.08■□□□□ 0
SSR4-202ENST00000370085 AAASQ9NRG9 546 aa15.08■□□□□ 0
SSR4-202ENST00000370085 ANKFY1Q9P2R3 1169 aa15.08■□□□□ 0
SSR4-202ENST00000370085 GIT1Q9Y2X7 761 aa15.08■□□□□ 0
SSR4-202ENST00000370085 ZMYM2Q9UBW7 1377 aa15.08■□□□□ 0
SSR4-202ENST00000370085 COL4A6Q14031 1691 aa15.07■□□□□ 0
SSR4-202ENST00000370085 GADD45BO75293 160 aaPredicted RBP15.07■□□□□ 0
SSR4-202ENST00000370085 NR1I2O75469 434 aa15.07■□□□□ 0
SSR4-202ENST00000370085 PIGRP01833 764 aa15.07■□□□□ 0
SSR4-202ENST00000370085 RPN1P04843 607 aaKnown RBP15.07■□□□□ 0
SSR4-202ENST00000370085 FGFR1P11362 822 aa15.07■□□□□ 0
SSR4-202ENST00000370085 YARSP54577 528 aaKnown RBP15.07■□□□□ 0
SSR4-202ENST00000370085 RNASELQ05823 741 aaKnown RBP15.07■□□□□ 0
SSR4-202ENST00000370085 SNW1Q13573 536 aaKnown RBP15.07■□□□□ 0
SSR4-202ENST00000370085 HSP90AA2PQ14568 343 aaPredicted RBP15.07■□□□□ 0
SSR4-202ENST00000370085 NOLC1Q14978 699 aaKnown RBP eCLIP15.07■□□□□ 0
SSR4-202ENST00000370085 ZC2HC1CQ53FD0 456 aaPredicted RBP15.07■□□□□ 0
SSR4-202ENST00000370085 CDR2LQ86X02 465 aaPredicted RBP15.07■□□□□ 0
SSR4-202ENST00000370085 ELOA2Q8IYF1 753 aaPredicted RBP15.07■□□□□ 0
SSR4-202ENST00000370085 LRRC43Q8N309 656 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms