RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 ZNF280BQ86YH2 543 aa22.69■■□□□ 1.22
SMNDC1-201ENST00000369592 ZBTB8OSQ8IWT0 167 aa22.69■■□□□ 1.22
SMNDC1-201ENST00000369592 GSTCDQ8NEC7 633 aa22.69■■□□□ 1.22
SMNDC1-201ENST00000369592 TIPINQ9BVW5 301 aa22.69■■□□□ 1.22
SMNDC1-201ENST00000369592 FOXD4L1Q9NU39 408 aa22.69■■□□□ 1.22
SMNDC1-201ENST00000369592 HES2Q9Y543 173 aa22.69■■□□□ 1.22
SMNDC1-201ENST00000369592 STX6O43752 255 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 ITGA4P13612 1032 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 KCNA5P22460 613 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 EFNA5P52803 228 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 MAPK6Q16659 721 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 CABP7Q86V35 215 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 CDR2LQ86X02 465 aaPredicted RBP22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 NTPCRQ9BSD7 190 aaKnown RBP22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 KIFC3Q9BVG8 833 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 NXF3Q9H4D5 531 aaKnown RBP22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 PDZD7Q9H5P4 517 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 EPHX3Q9H6B9 360 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 BLOC1S4Q9NUP1 217 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 MIOSQ9NXC5 875 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 ARHGAP28Q9P2N2 729 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 KANSL3Q9P2N6 904 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 DNAJB4Q9UDY4 337 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 FBXO2Q9UK22 296 aaPredicted RBP22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 INPP5FQ9Y2H2 1132 aa22.68■■□□□ 1.22
SMNDC1-201ENST00000369592 CARNS1A5YM72 827 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 PRKCBP05771 671 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 NPTX2P47972 431 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 DLX2Q07687 328 aaPredicted RBP22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 DSC1Q08554 894 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 KCNC3Q14003 757 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 ARSHQ5FYA8 562 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 NT5DC1Q5TFE4 455 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 TAS1R3Q7RTX0 852 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 EFHBQ8N7U6 833 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 DEPTORQ8TB45 409 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 BCL7CQ8WUZ0 217 aaPredicted RBP22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 IFT74Q96LB3 600 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 CCSER1Q9C0I3 900 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 C17orf75Q9HAS0 396 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 KCND2Q9NZV8 630 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 DAXXQ9UER7 740 aaPredicted RBP22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 GIT1Q9Y2X7 761 aa22.67■■□□□ 1.22
SMNDC1-201ENST00000369592 ARL5CA6NH57 179 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 NT5C1B-RDH14C9J2C7 533 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 LINC01565O15544 149 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 EFEMP2O95967 443 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 PLA2G4BP0C869 781 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 SLC11A1P49279 550 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 ALDH7A1P49419 539 aaKnown RBP22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 KCNN1Q92952 543 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 IGSF21Q96ID5 467 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 DRC1Q96MC2 740 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 GAD1Q99259 594 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 PLIN2Q99541 437 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 VN1R3Q9BXE9 311 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 ZSCAN16Q9H4T2 348 aaPredicted RBP22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 TMEM134Q9H6X4 195 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 PUF60Q9UHX1 559 aaKnown RBP22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 USP20Q9Y2K6 914 aa22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 SRPRBQ9Y5M8 271 aaKnown RBP22.66■■□□□ 1.22
SMNDC1-201ENST00000369592 TRIP11Q15643 1979 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 ZC3H11AO75152 810 aaKnown RBP eCLIP22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 TBX10O75333 385 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 NPTXRO95502 500 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 GLP2RO95838 553 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 UBA7P41226 1012 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 KRT17Q04695 432 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 PRPF4BQ13523 1007 aaKnown RBP22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 DUSP6Q16828 381 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 TMEM31Q5JXX7 168 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 EEF1DP3Q658K8 133 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 USP49Q70CQ1 688 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 COLGALT2Q8IYK4 626 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 URGCPQ8TCY9 931 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 MSLNLQ96KJ4 702 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 ZFP42Q96MM3 310 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 USP28Q96RU2 1077 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 TMEM175Q9BSA9 504 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 NGRNQ9NPE2 291 aaKnown RBP22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 CLDND1Q9NY35 253 aa22.65■■□□□ 1.22
SMNDC1-201ENST00000369592 GRXCR2A6NFK2 248 aa22.64■■□□□ 1.21
SMNDC1-201ENST00000369592 H3BQ06 376 aaPredicted RBP22.64■■□□□ 1.21
SMNDC1-201ENST00000369592 N4BP3O15049 544 aa22.64■■□□□ 1.21
SMNDC1-201ENST00000369592 CSPG5O95196 566 aa22.64■■□□□ 1.21
SMNDC1-201ENST00000369592 PEX3P56589 373 aa22.64■■□□□ 1.21
SMNDC1-201ENST00000369592 ZRSR1Q15695 479 aaKnown RBP22.64■■□□□ 1.21
SMNDC1-201ENST00000369592 DDX53Q86TM3 631 aaKnown RBP22.64■■□□□ 1.21
SMNDC1-201ENST00000369592 VN1R2Q8NFZ6 395 aa22.64■■□□□ 1.21
SMNDC1-201ENST00000369592 SPIRE2Q8WWL2 714 aa22.64■■□□□ 1.21
SMNDC1-201ENST00000369592 PPP2R3CQ969Q6 453 aa22.64■■□□□ 1.21
SMNDC1-201ENST00000369592 PTPRHQ9HD43 1115 aa22.64■■□□□ 1.21
SMNDC1-201ENST00000369592 CLEC1BQ9P126 229 aa22.64■■□□□ 1.21
SMNDC1-201ENST00000369592 HIDE1A8MVS5 230 aa22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 POMCP01189 267 aa22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 MLH1P40692 756 aa22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 NRIP1P48552 1158 aa22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 NASPP49321 788 aaPredicted RBP22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 SLC39A14Q15043 492 aa22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 KARSQ15046 597 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms