RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 DHX38Q92620 1227 aaKnown RBP13.72□□□□□ -0.21
PTPRK-207ENST00000368226 HSPBP1Q9NZL4 362 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 FBXO2Q9UK22 296 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-207ENST00000368226 STRIP2Q9ULQ0 834 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 TPX2Q9ULW0 747 aaKnown RBP13.72□□□□□ -0.21
PTPRK-207ENST00000368226 GRAP2O75791 330 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 SNCBQ16143 134 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 EFHC2Q5JST6 749 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 CYTH2Q99418 400 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 TEX13BQ9BXU2 312 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 ARHGEF40Q8TER5 1519 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 SYNGAP1Q96PV0 1343 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 EYA4O95677 639 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 SULT1E1P49888 294 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 DUOXA2Q1HG44 320 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 RABL6Q3YEC7 729 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-207ENST00000368226 USP33Q8TEY7 942 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.71□□□□□ -0.21
PTPRK-207ENST00000368226 CCL15-CCL14A0A0B4J2E2 113 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 RASA4BC9J798 803 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 E5RI56 91 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 RASA4O43374 803 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 ATP9BO43861 1147 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 CDH6P55285 790 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 CCL15Q16663 113 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 SGMS1Q86VZ5 419 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 SRRM1Q8IYB3 904 aaKnown RBP13.71□□□□□ -0.21
PTPRK-207ENST00000368226 CCNYL1Q8N7R7 359 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 ASIC4Q96FT7 647 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 STAP1Q9ULZ2 295 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 TAF6LQ9Y6J9 622 aa13.71□□□□□ -0.21
PTPRK-207ENST00000368226 NAALADL2Q58DX5 795 aa13.71□□□□□ -0.22
PTPRK-207ENST00000368226 METTL16Q86W50 562 aaKnown RBP13.71□□□□□ -0.22
PTPRK-207ENST00000368226 SPATA2LQ8IUW3 424 aaPredicted RBP13.71□□□□□ -0.22
PTPRK-207ENST00000368226 ELAC2Q9BQ52 826 aaKnown RBP13.71□□□□□ -0.22
PTPRK-207ENST00000368226 SLC13A1Q9BZW2 595 aa13.71□□□□□ -0.22
PTPRK-207ENST00000368226 RNF14Q9UBS8 474 aa13.71□□□□□ -0.22
PTPRK-207ENST00000368226 HUNKP57058 714 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 ZBED8Q8IZ13 594 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 FBXL13Q8NEE6 735 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 WHAMMQ8TF30 809 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 SNX19Q92543 992 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 DPF2Q92785 391 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 VPS39Q96JC1 886 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 EPS15L1Q9UBC2 864 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 USH1CQ9Y6N9 552 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 TECPR2O15040 1411 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 CHEK2O96017 543 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 ROR1Q01973 937 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 FBXO38Q6PIJ6 1188 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 IGDCC4Q8TDY8 1250 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 RAPGEF5Q92565 580 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 KLHL29Q96CT2 875 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 PPP1R36Q96LQ0 422 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 HAUS8Q9BT25 410 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 IP6K2Q9UHH9 426 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 PHEXP78562 749 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 DDX53Q86TM3 631 aaKnown RBP13.7□□□□□ -0.22
PTPRK-207ENST00000368226 NCLNQ969V3 563 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 DEFB129Q9H1M3 183 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 NDFIP2Q9NV92 336 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 ANKRD65E5RJM6 399 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 PDHBP11177 359 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 RASA1P20936 1047 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 PDIA2Q13087 525 aaKnown RBP13.7□□□□□ -0.22
PTPRK-207ENST00000368226 RMDN1Q96DB5 314 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 FAM118BQ9BPY3 351 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 KIFC3Q9BVG8 833 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 PHF20Q9BVI0 1012 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 Q9H521 79 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 TADA2AO75478 443 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 EXOSC10Q01780 885 aaKnown RBP13.7□□□□□ -0.22
PTPRK-207ENST00000368226 TFDP2Q14188 446 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 SF3B3Q15393 1217 aaKnown RBP13.7□□□□□ -0.22
PTPRK-207ENST00000368226 AGAP3Q96P47 875 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 OSBPL9Q96SU4 736 aa13.7□□□□□ -0.22
PTPRK-207ENST00000368226 SEPT5Q99719 369 aaPredicted RBP13.7□□□□□ -0.22
PTPRK-207ENST00000368226 VGLL3A8MV65 326 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 KBTBD13C9JR72 458 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 TAC1P20366 129 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 NNMTP40261 264 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 PAPOLAP51003 745 aaKnown RBP13.69□□□□□ -0.22
PTPRK-207ENST00000368226 BCAR1P56945 870 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 ANKMY2Q8IV38 441 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 ATG4CQ96DT6 458 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 PLA2G12BQ9BX93 195 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 MYO3AQ8NEV4 1616 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 SPAG7O75391 227 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 NR3C2P08235 984 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 ZNF467Q7Z7K2 595 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-207ENST00000368226 OR6P1Q8NGX9 317 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 N4BP2L2Q92802 583 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-207ENST00000368226 FAM49BQ9NUQ9 324 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 TTI1O43156 1089 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 PPARGP37231 505 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-207ENST00000368226 PRKCEQ02156 737 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 PIP4K2CQ8TBX8 421 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 TMEM106CQ9BVX2 250 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 ZDHHC9Q9Y397 364 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 KRT14P02533 472 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms