RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 PSMD6Q15008 389 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 RBBP5Q15291 538 aaKnown RBP11.47□□□□□ -0.57
PTPRK-205ENST00000368213 TMTC4Q5T4D3 741 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 ZNF746Q6NUN9 644 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-205ENST00000368213 ENOSF1Q7L5Y1 443 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 UHMK1Q8TAS1 419 aaKnown RBP11.47□□□□□ -0.57
PTPRK-205ENST00000368213 IGDCC4Q8TDY8 1250 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 KIAA1683Q9H0B3 1180 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 KCNQ5Q9NR82 932 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 DPP7Q9UHL4 492 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 TRIM49BA6NDI0 452 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 AMHP03971 560 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 TRIM49P0CI25 452 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 TRIM49CP0CI26 452 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 ZNF131P52739 623 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 TFDP2Q14188 446 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 PTPN21Q16825 1174 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 DHX38Q92620 1227 aaKnown RBP11.47□□□□□ -0.57
PTPRK-205ENST00000368213 GAS2O43903 313 aaKnown RBP11.47□□□□□ -0.57
PTPRK-205ENST00000368213 SRGAP2O75044 1071 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 SMARCA1P28370 1054 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 KPNA2P52292 529 aaKnown RBP11.47□□□□□ -0.57
PTPRK-205ENST00000368213 ERVK-9P63128 1117 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 ERVK-24P63145 666 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 ATP2C1P98194 919 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-205ENST00000368213 TMEM132BQ14DG7 1078 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 STOX1Q6ZVD7 989 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 SPATA24Q86W54 205 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 TRPV6Q9H1D0 765 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 HSPBP1Q9NZL4 362 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 POC1B-GALNT4F8VUJ3 575 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 HGSO14964 777 aaPredicted RBP11.46□□□□□ -0.57
PTPRK-205ENST00000368213 CAPN2P17655 700 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 STX2P32856 288 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 KCNB1Q14721 858 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 ALKBH5Q6P6C2 394 aaKnown RBP11.46□□□□□ -0.57
PTPRK-205ENST00000368213 RHOT2Q8IXI1 618 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 GMCL1P1Q8NEA9 526 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 KLK14Q9P0G3 267 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 RSPH14Q9UHP6 348 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 HEY1Q9Y5J3 304 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 NR1H3Q13133 447 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 SLITRK1Q96PX8 696 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 HOMER3Q9NSC5 361 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 OLA1Q9NTK5 396 aaKnown RBP11.46□□□□□ -0.57
PTPRK-205ENST00000368213 PCSK1NQ9UHG2 260 aa11.46□□□□□ -0.57
PTPRK-205ENST00000368213 EFCAB8A8MWE9 144 aa11.46□□□□□ -0.58
PTPRK-205ENST00000368213 MSCO60682 206 aa11.46□□□□□ -0.58
PTPRK-205ENST00000368213 CHGBP05060 677 aa11.46□□□□□ -0.58
PTPRK-205ENST00000368213 ODC1P11926 461 aa11.46□□□□□ -0.58
PTPRK-205ENST00000368213 C11orf57Q6ZUT1 292 aaPredicted RBP11.46□□□□□ -0.58
PTPRK-205ENST00000368213 CCHCR1Q8TD31 782 aa11.46□□□□□ -0.58
PTPRK-205ENST00000368213 MRFAP1L1Q96HT8 127 aa11.46□□□□□ -0.58
PTPRK-205ENST00000368213 NHEJ1Q9H9Q4 299 aaPredicted RBP11.46□□□□□ -0.58
PTPRK-205ENST00000368213 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.46□□□□□ -0.58
PTPRK-205ENST00000368213 KCND2Q9NZV8 630 aa11.46□□□□□ -0.58
PTPRK-205ENST00000368213 VIL1P09327 827 aaKnown RBP11.46□□□□□ -0.58
PTPRK-205ENST00000368213 ZNF286BP0CG31 522 aa11.46□□□□□ -0.58
PTPRK-205ENST00000368213 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.58
PTPRK-205ENST00000368213 TLK2Q86UE8 772 aa11.46□□□□□ -0.58
PTPRK-205ENST00000368213 GIMAP7Q8NHV1 300 aa11.46□□□□□ -0.58
PTPRK-205ENST00000368213 CFAP36Q96G28 342 aa11.46□□□□□ -0.58
PTPRK-205ENST00000368213 ASMTLO95671 621 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 KRT31Q15323 416 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 KIZQ2M2Z5 673 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 MAP3K14Q99558 947 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 ANKEF1Q9NU02 776 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 PCDHB8Q9UN66 801 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 H3BRJ5 948 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 DFFAO00273 331 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 TJP3O95049 919 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 CD2BP2O95400 341 aaKnown RBP11.45□□□□□ -0.58
PTPRK-205ENST00000368213 RWDD2BP57060 319 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 FKBP1AP62942 108 aaKnown RBP11.45□□□□□ -0.58
PTPRK-205ENST00000368213 DRP2Q13474 957 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 ANKRD20A3Q5VUR7 823 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 PHF20Q9BVI0 1012 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 ABHD16BQ9H3Z7 469 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 DHX35Q9H5Z1 703 aaKnown RBP11.45□□□□□ -0.58
PTPRK-205ENST00000368213 PLEKHA5Q9HAU0 1116 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 ABI2Q9NYB9 513 aaPredicted RBP11.45□□□□□ -0.58
PTPRK-205ENST00000368213 FAM205AQ6ZU69 1335 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 GLTPD2A6NH11 291 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 FTCDO95954 541 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 PRCPP42785 496 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 SULT1E1P49888 294 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 FKBP1BP68106 108 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 BTG3Q14201 252 aaPredicted RBP11.45□□□□□ -0.58
PTPRK-205ENST00000368213 STILQ15468 1287 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 SAMD3Q8N6K7 520 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 EFHBQ8N7U6 833 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 STMN2Q93045 179 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 GMCL1Q96IK5 515 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 CYP26B1Q9NR63 512 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 BCORL1Q5H9F3 1711 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 SSTR3P32745 418 aaPredicted RBP11.45□□□□□ -0.58
PTPRK-205ENST00000368213 SATB1Q01826 763 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 DNERQ8NFT8 737 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 CEP72Q9P209 647 aa11.45□□□□□ -0.58
PTPRK-205ENST00000368213 ADAMTS1Q9UHI8 967 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms