RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 POLR3CQ9BUI4 534 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-203ENST00000368207 TARS2Q9BW92 718 aaKnown RBP13.14□□□□□ -0.31
PTPRK-203ENST00000368207 KCND2Q9NZV8 630 aa13.14□□□□□ -0.31
PTPRK-203ENST00000368207 ARHGEF37A1IGU5 675 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 GMNNO75496 209 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 SCP2P22307 547 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 SDC4P31431 198 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 RWDD4Q6NW29 188 aaKnown RBP13.13□□□□□ -0.31
PTPRK-203ENST00000368207 RAPH1Q70E73 1250 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.13□□□□□ -0.311e-6■□□□□ 8.7
PTPRK-203ENST00000368207 SMARCAD1Q9H4L7 1026 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 KBTBD4Q9NVX7 518 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 STRIP2Q9ULQ0 834 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 NOC2LQ9Y3T9 749 aaKnown RBP13.13□□□□□ -0.31
PTPRK-203ENST00000368207 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.13□□□□□ -0.31
PTPRK-203ENST00000368207 CCL15-CCL14A0A0B4J2E2 113 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 SSU72P8A0A1W2PR75 194 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 GOLGA8MH3BSY2 632 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 HOXA10P31260 410 aaPredicted RBP13.13□□□□□ -0.31
PTPRK-203ENST00000368207 SREBF1P36956 1147 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 CCL15Q16663 113 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 FAM102AQ5T9C2 384 aaPredicted RBP13.13□□□□□ -0.31
PTPRK-203ENST00000368207 GJB7Q6PEY0 223 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 CCHCR1Q8TD31 782 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 MS4A14Q96JA4 679 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 FUCA2Q9BTY2 467 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 ZCCHC17Q9NP64 241 aaKnown RBP13.13□□□□□ -0.31
PTPRK-203ENST00000368207 SAYSD1Q9NPB0 183 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 SLURP2P0DP57 97 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 CFAP36Q96G28 342 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 SNX12Q9UMY4 172 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 AGAP1Q9UPQ3 857 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 PIN4Q9Y237 131 aaKnown RBP13.13□□□□□ -0.31
PTPRK-203ENST00000368207 C3P01024 1663 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 WDR91A4D1P6 747 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 PIK3R2O00459 728 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 C6orf222P0C671 652 aaPredicted RBP13.13□□□□□ -0.31
PTPRK-203ENST00000368207 BACE1P56817 501 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 DACT2Q5SW24 774 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 DCLK2Q8N568 766 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 CYP2W1Q8TAV3 490 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 ASNSD1Q9NWL6 643 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 AMACRQ9UHK6 382 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 SLC12A6Q9UHW9 1150 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 CPSF3Q9UKF6 684 aaKnown RBP13.13□□□□□ -0.31
PTPRK-203ENST00000368207 DIS3Q9Y2L1 958 aaKnown RBP13.13□□□□□ -0.31
PTPRK-203ENST00000368207 UBR1Q8IWV7 1749 aa13.13□□□□□ -0.31
PTPRK-203ENST00000368207 CYTH3O43739 400 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 TADA3O75528 432 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 MT-ND3P03897 115 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 CALRP27797 417 aaKnown RBP13.12□□□□□ -0.31
PTPRK-203ENST00000368207 GARSP41250 739 aaKnown RBP13.12□□□□□ -0.31
PTPRK-203ENST00000368207 NCOA4Q13772 614 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 CENPUQ71F23 418 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 TRIM59Q8IWR1 403 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 ELOA2Q8IYF1 753 aaPredicted RBP13.12□□□□□ -0.31
PTPRK-203ENST00000368207 C1orf54Q8WWF1 131 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 PI4K2AQ9BTU6 479 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 MTFR1LQ9H019 292 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 MAFGO15525 162 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 ANXA13P27216 316 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 ACTR2P61160 394 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 TFDP2Q14188 446 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 HP1BP3Q5SSJ5 553 aaPredicted RBP13.12□□□□□ -0.31
PTPRK-203ENST00000368207 CPA5Q8WXQ8 436 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 ACAP3Q96P50 834 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 EFCC1Q9HA90 598 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 RIC1Q4ADV7 1423 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 PLEKP08567 350 aaPredicted RBP13.12□□□□□ -0.31
PTPRK-203ENST00000368207 VEGFAP15692 232 aaPredicted RBP13.12□□□□□ -0.31
PTPRK-203ENST00000368207 VCAM1P19320 739 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 CA4P22748 312 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 KCNJ6P48051 423 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 ZNF157P51786 506 aaPredicted RBP13.12□□□□□ -0.31
PTPRK-203ENST00000368207 EVX2Q03828 476 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 MXD4Q14582 209 aaPredicted RBP13.12□□□□□ -0.31
PTPRK-203ENST00000368207 RBM43Q6ZSC3 357 aaKnown RBP13.12□□□□□ -0.31
PTPRK-203ENST00000368207 ARHGAP24Q8N264 748 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 BBS5Q8N3I7 341 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 CHST13Q8NET6 341 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 GDAP1Q8TB36 358 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 RNPC3Q96LT9 517 aaKnown RBP13.12□□□□□ -0.31
PTPRK-203ENST00000368207 GOLPH3Q9H4A6 298 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 SMARCAL1Q9NZC9 954 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 AP5Z1O43299 807 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 GSTA1P08263 222 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 GSTA2P09210 222 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 CTSHP09668 335 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 RARBP10826 455 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 VSNL1P62760 191 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 RPS6KA2Q15349 733 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 ARL13BQ3SXY8 428 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 EPC2Q52LR7 807 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 MCUQ8NE86 351 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 FAF2Q96CS3 445 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 AGPAT3Q9NRZ7 376 aa13.12□□□□□ -0.31
PTPRK-203ENST00000368207 RHOT1Q8IXI2 618 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
PTPRK-203ENST00000368207 FAM163AQ96GL9 167 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-203ENST00000368207 LRRC1Q9BTT6 524 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms