RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 SMARCAD1Q9H4L7 1026 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 DDX28Q9NUL7 540 aaKnown RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 AIPL1Q9NZN9 384 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 SLC25A13Q9UJS0 675 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 PASKQ96RG2 1323 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 LAMC1P11047 1609 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 F5H6K3 240 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 IPO5O00410 1097 aaKnown RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 MMP1P03956 469 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 RGS7P49802 495 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 KLRC3Q07444 240 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 SYTL3Q4VX76 610 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 LLGL2Q6P1M3 1020 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 CASS4Q9NQ75 786 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 INTS13Q9NVM9 706 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 FBXO40Q9UH90 709 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 JCADQ9P266 1359 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 PTPRTO14522 1441 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 SNTNA6NMZ2 147 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 SART1O43290 800 aaKnown RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 CYP19A1P11511 503 aaPredicted RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 CASP14P31944 242 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 NUP62P37198 522 aaPredicted RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 DAB2P98082 770 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 DHX9Q08211 1270 aaKnown RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 SURF1Q15526 300 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 FBXL13Q8NEE6 735 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 P2RX5Q93086 422 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 CNGB3Q9NQW8 809 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 SPTLC3Q9NUV7 552 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 RASSF10A6NK89 507 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 RGL2O15211 777 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 PBLDP30039 288 aaPredicted RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 OCRLQ01968 901 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 CACUL1Q86Y37 369 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 LXNQ9BS40 222 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 APOL5Q9BWW9 433 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 SLC9A2Q9UBY0 812 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 PCDHA5Q9Y5H7 936 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 IQSEC2Q5JU85 1478 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 UTYO14607 1347 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 ASB14A6NK59 587 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 CYP27B1O15528 508 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 BRD1O95696 1058 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 PCP11498 1178 aaKnown RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 ALDH7A1P49419 539 aaKnown RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 GTF2H3Q13889 308 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 LRRC71Q8N4P6 559 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 TRIM58Q8NG06 486 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 RAPGEF5Q92565 580 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 TMEM47Q9BQJ4 181 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 ZSWIM6Q9HCJ5 1215 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 PAPOLBQ9NRJ5 636 aaKnown RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 ARHGAP10A1A4S6 786 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 TCF3P15923 654 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 SRRM1Q8IYB3 904 aaKnown RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 GPRC5AQ8NFJ5 357 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 DCUN1D1Q96GG9 259 aa7.5□□□□□ -1.21
SPTA1-201ENST00000368147 JPH1Q9HDC5 661 aaPredicted RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 GEMIN8Q9NWZ8 242 aaKnown RBP7.5□□□□□ -1.21
SPTA1-201ENST00000368147 TEX28O15482 410 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 NPM3O75607 178 aaKnown RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 H2AFZP0C0S5 128 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 PYGBP11216 843 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 AKT1P31749 480 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 TRAF7Q6Q0C0 670 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 H2AFVQ71UI9 128 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 SP8Q8IXZ3 490 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 AGR3Q8TD06 166 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 PPP1R13LQ8WUF5 828 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 MAML1Q92585 1016 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ABHD8Q96I13 439 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 MRPL40Q9NQ50 206 aaKnown RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ABI2Q9NYB9 513 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 GTSE1Q9NYZ3 720 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 UBAP1Q9NZ09 502 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 TTC7AQ9ULT0 858 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 CDC42BPBQ9Y5S2 1711 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 E2F8A0AVK6 867 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 TTLL13PA6NNM8 815 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 KRT6AP02538 564 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 KRT6BP04259 564 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 CETPP11597 493 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 KRT6CP48668 564 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 PKP1Q13835 747 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 SSH3Q8TE77 659 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 KATNAL1Q9BW62 490 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 FOXP1Q9H334 677 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 MRPL47Q9HD33 250 aaKnown RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 SCUBE2Q9NQ36 999 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 STRIP2Q9ULQ0 834 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 CDC42BPAQ5VT25 1732 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 PREX2Q70Z35 1606 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ABCC12Q96J65 1359 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ZC3H11AO75152 810 aaKnown RBP eCLIP7.49□□□□□ -1.212e-6■■■□□ 17.7
SPTA1-201ENST00000368147 MMEP08473 750 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 YWHABP31946 246 aaKnown RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 NUMA1Q14980 2115 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ZNF658Q5TYW1 1059 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ZNF746Q6NUN9 644 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms