RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 TRPC5Q9UL62 973 aaPredicted RBP13.27□□□□□ -0.28
PTPN7-202ENST00000367279 MTUS1Q9ULD2 1270 aa13.27□□□□□ -0.28
PTPN7-202ENST00000367279 DIS3Q9Y2L1 958 aaKnown RBP13.27□□□□□ -0.28
PTPN7-202ENST00000367279 KIAA0391O15091 583 aaKnown RBP13.27□□□□□ -0.29
PTPN7-202ENST00000367279 PPFIA2O75334 1257 aa13.27□□□□□ -0.29
PTPN7-202ENST00000367279 VIL1P09327 827 aaKnown RBP13.27□□□□□ -0.29
PTPN7-202ENST00000367279 ITGB5P18084 799 aa13.27□□□□□ -0.29
PTPN7-202ENST00000367279 SSR1P43307 286 aaKnown RBP13.27□□□□□ -0.29
PTPN7-202ENST00000367279 POU5F1Q01860 360 aaKnown RBP13.27□□□□□ -0.29
PTPN7-202ENST00000367279 SLC15A2Q16348 729 aa13.27□□□□□ -0.29
PTPN7-202ENST00000367279 XKR9Q5GH70 373 aa13.27□□□□□ -0.29
PTPN7-202ENST00000367279 TTC27Q6P3X3 843 aa13.27□□□□□ -0.29
PTPN7-202ENST00000367279 NOP9Q86U38 636 aaKnown RBP13.27□□□□□ -0.29
PTPN7-202ENST00000367279 CBWD2Q8IUF1 395 aa13.27□□□□□ -0.29
PTPN7-202ENST00000367279 FMNL3Q8IVF7 1028 aa13.27□□□□□ -0.29
PTPN7-202ENST00000367279 PRELID2Q8N945 189 aa13.27□□□□□ -0.29
PTPN7-202ENST00000367279 ZNF564Q8TBZ8 553 aaPredicted RBP13.27□□□□□ -0.29
PTPN7-202ENST00000367279 C1orf54Q8WWF1 131 aa13.27□□□□□ -0.29
PTPN7-202ENST00000367279 RNF25Q96BH1 459 aaPredicted RBP13.27□□□□□ -0.29
PTPN7-202ENST00000367279 MXRA8Q9BRK3 442 aa13.27□□□□□ -0.29
PTPN7-202ENST00000367279 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
PTPN7-202ENST00000367279 CTDP1Q9Y5B0 961 aaPredicted RBP13.27□□□□□ -0.29
PTPN7-202ENST00000367279 ZHX2Q9Y6X8 837 aa13.27□□□□□ -0.29
PTPN7-202ENST00000367279 FAM187AA6NFU0 413 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 NFIBO00712 420 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 ENTPD3O75355 529 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 ACSL3O95573 720 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 ZNF131P52739 623 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 EIF3BP55884 814 aaKnown RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 DHX34Q14147 1143 aaKnown RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 C2CD6Q53TS8 623 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 DHX38Q92620 1227 aaKnown RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 SCLT1Q96NL6 688 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 XPO6Q96QU8 1125 aaKnown RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 JPH2Q9BR39 696 aaPredicted RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 TAOK3Q9H2K8 898 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 PABPC3Q9H361 631 aaKnown RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 TMEM206Q9H813 350 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 CD248Q9HCU0 757 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 MLXIPLQ9NP71 852 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 TOPORSQ9NS56 1045 aaPredicted RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 ASIC3Q9UHC3 531 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 HGSO14964 777 aaPredicted RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 RDXP35241 583 aaKnown RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 ACTN3Q08043 901 aaPredicted RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 ADCY1Q08828 1119 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 CALCOCO2Q13137 446 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 DLGAP5Q15398 846 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 PPP2R5EQ16537 467 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 SPRED3Q2MJR0 410 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 NBPF9Q3BBW0 867 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 ZFYVE27Q5T4F4 411 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 CNPY4Q8N129 248 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 C1orf131Q8NDD1 294 aaKnown RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 TMEM39BQ9GZU3 492 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 INTS9Q9NV88 658 aaKnown RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 HAUS2Q9NVX0 235 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 TMX2Q9Y320 296 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 MIF4GDA9UHW6 222 aaKnown RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 ANKRD63C9JTQ0 380 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 RTN2O75298 545 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 FSBPO95073 299 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 CHRNA3P32297 505 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 SSTR3P32745 418 aaPredicted RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 LRRC14Q15048 493 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 CEP57Q86XR8 500 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 PRPF38AQ8NAV1 312 aaKnown RBP13.26□□□□□ -0.29
PTPN7-202ENST00000367279 CHMP6Q96FZ7 201 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 TMEM117Q9H0C3 514 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 VCPKMTQ9H867 229 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 ZDHHC18Q9NUE0 388 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 CD2APQ9Y5K6 639 aa13.26□□□□□ -0.29
PTPN7-202ENST00000367279 UBE4BO95155 1302 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 CLDN3O15551 220 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 C21orf2O43822 256 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 P4HBP07237 508 aaKnown RBP13.25□□□□□ -0.29
PTPN7-202ENST00000367279 FNTAP49354 379 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 SOX10P56693 466 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 DGKZQ13574 1117 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 RASA3Q14644 834 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 EMC10Q5UCC4 262 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 LMO3Q8TAP4 145 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 PLEKHO2Q8TD55 490 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 PRMT1Q99873 361 aaKnown RBP13.25□□□□□ -0.29
PTPN7-202ENST00000367279 FAM118BQ9BPY3 351 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 SYT11Q9BT88 431 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 PI4K2AQ9BTU6 479 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 GGT7Q9UJ14 662 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 GREB1LQ9C091 1923 aaPredicted RBP13.25□□□□□ -0.29
PTPN7-202ENST00000367279 C10orf71Q711Q0 1435 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 TESPA1A2RU30 521 aaPredicted RBP13.25□□□□□ -0.29
PTPN7-202ENST00000367279 ZDHHC24Q6UX98 284 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 RNF207Q6ZRF8 634 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 OGFOD1Q8N543 542 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 ELAC2Q9BQ52 826 aaKnown RBP13.25□□□□□ -0.29
PTPN7-202ENST00000367279 OSBPL7Q9BZF2 842 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 SLC40A1Q9NP59 571 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 KCNK9Q9NPC2 374 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms