RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 ZFP42Q96MM3 310 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 SESN1Q9Y6P5 492 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 A0A087WWV3 80 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 DFFAO00273 331 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 HSPA13P48723 471 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 GYS2P54840 703 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 GFPT1Q06210 699 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 CYLC2Q14093 348 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 ANKRD7Q92527 254 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 ASCC2Q9H1I8 757 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 KIAA1586Q9HCI6 787 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 CAB39Q9Y376 341 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 CCDC15Q0P6D6 951 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 CYTH1Q15438 398 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 ADCK5Q3MIX3 580 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 KRT75O95678 551 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 MARK3P27448 753 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 AFF4Q9UHB7 1163 aaKnown RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 MYO1GB0I1T2 1018 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 CYP21A2P08686 494 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 MRPS25P82663 173 aaKnown RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 ACTN3Q08043 901 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 STAT4Q14765 748 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 PPP1R18Q6NYC8 613 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 LRRC31Q6UY01 552 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 TERB1Q8NA31 727 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 ZNF507Q8TCN5 953 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 BTN2A2Q8WVV5 523 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 NLRP4Q96MN2 994 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 NGRNQ9NPE2 291 aaKnown RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 POLE3Q9NRF9 147 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 USE1Q9NZ43 259 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 NR3C1P04150 777 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 NR5A1Q13285 461 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 MTERF2Q49AM1 385 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 DPY19L2Q6NUT2 758 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 NFRKBQ6P4R8 1299 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 NUP93Q8N1F7 819 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 FTOQ9C0B1 505 aaKnown RBP eCLIP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 PNMA6FA0A0J9YX94 578 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 C16orf96A6NNT2 1141 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 HIC1Q14526 733 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 NAALADL2Q58DX5 795 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 TMEM270Q6UE05 265 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 GEMIN8Q9NWZ8 242 aaKnown RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 MOSPD1Q9UJG1 213 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 TRPM1Q7Z4N2 1603 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 KRR1Q13601 381 aaKnown RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 OLFML2BQ68BL8 750 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 HEATR6Q6AI08 1181 aaKnown RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 MFN1Q8IWA4 741 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 ZNF564Q8TBZ8 553 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 CLCA2Q9UQC9 943 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 ADGRG1Q9Y653 693 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 PVALEFA0A1B0GWK0 134 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 KRT7P08729 469 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 ADAM22Q9P0K1 906 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 TTC7AQ9ULT0 858 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 CACNA1FO60840 1977 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 PYGMP11217 842 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 HOXA13P31271 388 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 SLC16A2P36021 539 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 ARFIP2P53365 341 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 TAP1Q03518 808 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 WASHC5Q12768 1159 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 DOK7Q18PE1 504 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 ZNF667Q5HYK9 610 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 THEM5Q8N1Q8 247 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 RBM46Q8TBY0 533 aaKnown RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 HNRNPLLQ8WVV9 542 aaKnown RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 PPP1R36Q96LQ0 422 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 HEMGNQ9BXL5 484 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 KANSL2Q9H9L4 492 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 DDX56Q9NY93 547 aaKnown RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 SMAPO00193 183 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 DEFA1P59665 94 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 DEFA3P59666 94 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 TSPY1Q01534 308 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 KPNB1Q14974 876 aaKnown RBP7.73□□□□□ -1.17
SYNE1-208ENST00000367256 HIF1AQ16665 826 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 ENOSF1Q7L5Y1 443 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 LUZP2Q86TE4 346 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 SGSM3Q96HU1 749 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 MAD2L2Q9UI95 211 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 ADCY10Q96PN6 1610 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 SPHKAPQ2M3C7 1700 aa7.73□□□□□ -1.17
SYNE1-208ENST00000367256 M0QYV0 167 aa7.72□□□□□ -1.17
SYNE1-208ENST00000367256 CD2BP2O95400 341 aaKnown RBP7.72□□□□□ -1.17
SYNE1-208ENST00000367256 CTTNQ14247 550 aaKnown RBP7.72□□□□□ -1.17
SYNE1-208ENST00000367256 CRYMQ14894 314 aa7.72□□□□□ -1.17
SYNE1-208ENST00000367256 IL1RAPL1Q9NZN1 696 aa7.72□□□□□ -1.17
SYNE1-208ENST00000367256 NLRP11P59045 1033 aaKnown RBP7.72□□□□□ -1.17
SYNE1-208ENST00000367256 PDIA2Q13087 525 aaKnown RBP7.72□□□□□ -1.17
SYNE1-208ENST00000367256 SLC27A3Q5K4L6 730 aa7.72□□□□□ -1.17
SYNE1-208ENST00000367256 TNIP2Q8NFZ5 429 aa7.72□□□□□ -1.17
SYNE1-208ENST00000367256 ZNF496Q96IT1 587 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-208ENST00000367256 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-208ENST00000367256 PGM1P36871 562 aa7.72□□□□□ -1.17
SYNE1-208ENST00000367256 GPC5P78333 572 aa7.72□□□□□ -1.17
SYNE1-208ENST00000367256 AGR3Q8TD06 166 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms