RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 KMT5AQ9NQR1 393 aa4.75□□□□□ -1.65
RNU6-28P-201ENST00000362378 SPATA6Q9NWH7 488 aaPredicted RBP4.75□□□□□ -1.65
RNU6-28P-201ENST00000362378 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.75□□□□□ -1.65
RNU6-28P-201ENST00000362378 CDC42EP3Q9UKI2 254 aa4.75□□□□□ -1.65
RNU6-28P-201ENST00000362378 PCDHB1Q9Y5F3 818 aa4.75□□□□□ -1.65
RNU6-28P-201ENST00000362378 PMM2O15305 246 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 AKR1B10O60218 316 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 ENDOD1O94919 500 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 PLA2G1BP04054 148 aaKnown RBP4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 RPLP2P05387 115 aaKnown RBP4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 IFIT2P09913 472 aaKnown RBP4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 HNRNPLP14866 589 aaKnown RBP eCLIP4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 HTR3AP46098 478 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 MAP2K6P52564 334 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 CAP1Q01518 475 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 SMAD4Q13485 552 aaKnown RBP4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 SEMA5AQ13591 1074 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 MORC3Q14149 939 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 LLGL1Q15334 1064 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 UBE3CQ15386 1083 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 MLANAQ16655 118 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 MST1LQ2TV78 715 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 ANO6Q4KMQ2 910 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 TRMT10BQ6PF06 316 aaKnown RBP4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 NPNTQ6UXI9 565 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 ABHD15Q6UXT9 468 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 CCDC149Q6ZUS6 474 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 CLEC14AQ86T13 490 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 FAM129CQ86XR2 697 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 EXOC8Q8IYI6 725 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 IFNL2Q8IZJ0 200 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 FNIP1Q8TF40 1166 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 KAT5Q92993 513 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 GFM2Q969S9 779 aaKnown RBP4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 PTPN18Q99952 460 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 B3GNT5Q9BYG0 378 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 KATNBL1Q9H079 304 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 FAM50BQ9Y247 325 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 STXBP5LQ9Y2K9 1186 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 PCDHA13Q9Y5I0 950 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 PMF1-BGLAPU3KQ54 211 aa4.74□□□□□ -1.65
RNU6-28P-201ENST00000362378 A0A088AWK7 358 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 LRRC10BA6NIK2 292 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 DAPK3O43293 454 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 LDHAP00338 332 aaKnown RBP4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 SLC5A1P13866 664 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 RPL13P26373 211 aaKnown RBP4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 SLC6A9P48067 706 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 STAT5BP51692 787 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 KCNQ1P51787 676 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 WNT3AP56704 352 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 GJA9P57773 515 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 CDC42EP1Q00587 391 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 DLX2Q07687 328 aaPredicted RBP4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 ZNF827Q17R98 1081 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 LONRF3Q496Y0 759 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 Q6ZVL8 140 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 REXO1L1PQ8IX06 675 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 DRC7Q8IY82 874 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 NUDT10Q8NFP7 164 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 KLHDC4Q8TBB5 520 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 RGMAQ96B86 450 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 NUDT11Q96G61 164 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 CDK5RAP3Q96JB5 506 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 SIGLEC10Q96LC7 697 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 DMRTA2Q96SC8 542 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 ELAC2Q9BQ52 826 aaKnown RBP4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 NAA15Q9BXJ9 866 aaKnown RBP4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 BHMT2Q9H2M3 363 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 EPB41L4AQ9HCS5 686 aaPredicted RBP4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 KLHL11Q9NVR0 708 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 PHTF1Q9UMS5 762 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 SIK3Q9Y2K2 1263 aa4.73□□□□□ -1.65
RNU6-28P-201ENST00000362378 CAPN8A6NHC0 703 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 GOLIM4O00461 696 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 PRAMEF4O60810 478 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 FTLP02792 175 aaPredicted RBP4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 HMGCRP04035 888 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 ECHS1P30084 290 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 ADSLP30566 484 aaPredicted RBP4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 IRAK1P51617 712 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 HK3P52790 923 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 CACNB3P54284 484 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 GPSM2P81274 684 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 KIAA0753Q2KHM9 967 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 RNF220Q5VTB9 566 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 DARS2Q6PI48 645 aaKnown RBP4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 Q6ZUG5 572 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 LARP4Q71RC2 724 aaKnown RBP eCLIP4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 SAPCD2Q86UD0 394 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 RHOT1Q8IXI2 618 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 KRT78Q8N1N4 520 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 MSL3Q8N5Y2 521 aaKnown RBP4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 ZNF480Q8WV37 535 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 KCNN1Q92952 543 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 LPPQ93052 612 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 CYFIP2Q96F07 1278 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 AJUBAQ96IF1 538 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 MRGPRX4Q96LA9 322 aa4.72□□□□□ -1.65
RNU6-28P-201ENST00000362378 YTHDC1Q96MU7 727 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms