RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 EPB41L5Q9HCM4 733 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 G3BP2Q9UN86 482 aaKnown RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 PCDHB6Q9Y5E3 794 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 KDM6AO15550 1401 aaPredicted RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 SYNDIG1LA6NDD5 238 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 PSMD3O43242 534 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 IFNAR2P48551 515 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 VCPP55072 806 aaKnown RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 DHX9Q08211 1270 aaKnown RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 RBL2Q08999 1139 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 LLGL1Q15334 1064 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 ZSCAN26Q16670 478 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 CYP4A22Q5TCH4 519 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 OPTNQ96CV9 577 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 SEPT5Q99719 369 aaPredicted RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 C11orf70Q9BRQ4 267 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 POLR3CQ9BUI4 534 aaPredicted RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 DHX35Q9H5Z1 703 aaKnown RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 CLASP1Q7Z460 1538 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 KDM5AP29375 1690 aaKnown RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 COPEO14579 308 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 FAM102AQ5T9C2 384 aaPredicted RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 ADCK2Q7Z695 626 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 TRIM59Q8IWR1 403 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 ADGRF4Q8IZF3 695 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 TBC1D16Q8TBP0 767 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 ZNF668Q96K58 619 aaPredicted RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 KIFC3Q9BVG8 833 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 MRPL40Q9NQ50 206 aaKnown RBP11.63□□□□□ -0.55
CLIP1-203ENST00000361654 AIPL1Q9NZN9 384 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 ARHGAP31Q2M1Z3 1444 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 CPDO75976 1380 aa11.63□□□□□ -0.55
CLIP1-203ENST00000361654 FTCDO95954 541 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 CYP2C9P11712 490 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 AKT1P31749 480 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 EIF3BP55884 814 aaKnown RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 COPS2P61201 443 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 CACNB2Q08289 660 aaPredicted RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 CEP55Q53EZ4 464 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 SLITRK1Q96PX8 696 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 TACO1Q9BSH4 297 aaKnown RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 CNOT10Q9H9A5 744 aaKnown RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 NHEJ1Q9H9Q4 299 aaPredicted RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 ZNF70Q9UC06 446 aaPredicted RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 E2F6O75461 281 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 ALDH1A2O94788 518 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 AP1B1Q10567 949 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 ADCK5Q3MIX3 580 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 FSCBQ5H9T9 825 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 FAM151AQ8WW52 585 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 MED15Q96RN5 788 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 FGFR1OP2Q9NVK5 253 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 CCDC188H7C350 402 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 CFLARO15519 480 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 SUPT20HL2P0C7V6 817 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 RFC5P40937 340 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 OR1G1P47890 313 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 CAV1Q03135 178 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 KNOP1Q1ED39 458 aaKnown RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 PASD1Q8IV76 773 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 SCFD1Q8WVM8 642 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 DNAJC17Q9NVM6 304 aaKnown RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 GTSE1Q9NYZ3 720 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 PCDHA13Q9Y5I0 950 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 ERVK-7P63135 1459 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 DFFAO00273 331 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 TPI1P60174 286 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 MGAT5BQ3V5L5 792 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 ZC3H12BQ5HYM0 836 aaKnown RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 PPP1R2P1Q96PQ5 205 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 POTEMA6NI47 508 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 SESN3P58005 492 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 LAMC2Q13753 1193 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 KLHL38Q2WGJ6 581 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 KHDRBS2Q5VWX1 349 aaKnown RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 E4F1Q66K89 784 aaPredicted RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 SLC35F6Q8N357 371 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 ARHGAP18Q8N392 663 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 PCSK9Q8NBP7 692 aaKnown RBP11.62□□□□□ -0.55
CLIP1-203ENST00000361654 CXorf38Q8TB03 319 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 TUFT1Q9NNX1 390 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 NR2E3Q9Y5X4 410 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 STK36Q9NRP7 1315 aa11.62□□□□□ -0.55
CLIP1-203ENST00000361654 GCC2Q8IWJ2 1684 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 RSPH10B2B2RC85 870 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 H7C4K7 107 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 RSPH10BP0C881 870 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 BAATQ14032 418 aaPredicted RBP11.61□□□□□ -0.55
CLIP1-203ENST00000361654 PHKG1Q16816 387 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 SV2CQ496J9 727 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 TRIM48Q8IWZ4 208 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 MUC3BQ9H195 1237 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 RGL1Q9NZL6 768 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 CEP72Q9P209 647 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 RCOR1Q9UKL0 485 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 CDC42BPGQ6DT37 1551 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 EEF1B2P24534 225 aaKnown RBP11.61□□□□□ -0.55
CLIP1-203ENST00000361654 POU5F1BQ06416 359 aa11.61□□□□□ -0.55
CLIP1-203ENST00000361654 CYFIP1Q7L576 1253 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms