RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 NLRX1Q86UT6 975 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 MYCT1Q8N699 235 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 ZNF280CQ8ND82 737 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 ADAM7Q9H2U9 754 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.79□□□□□ -0.842e-14■□□□□ 9.4
TOP1-201ENST00000361337 PPP1R9AQ9ULJ8 1098 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 L3MBTL1Q9Y468 752 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 MYO9BQ13459 2157 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 LRRD1A4D1F6 860 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 POTEFA5A3E0 1075 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 NFIBO00712 420 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 KCNA3P22001 575 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 PON1P27169 355 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 CASP4P49662 377 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 ELF3P78545 371 aaPredicted RBP9.79□□□□□ -0.84
TOP1-201ENST00000361337 POU5F1Q01860 360 aaKnown RBP9.79□□□□□ -0.84
TOP1-201ENST00000361337 SEPT7Q16181 437 aaKnown RBP9.79□□□□□ -0.84
TOP1-201ENST00000361337 ARSHQ5FYA8 562 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 THEMIS2Q5TEJ8 643 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 GKAP1Q5VSY0 366 aaPredicted RBP9.79□□□□□ -0.84
TOP1-201ENST00000361337 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 POTEEQ6S8J3 1075 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 RNF207Q6ZRF8 634 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 ARMC9Q7Z3E5 817 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 NT5DC3Q86UY8 548 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 LMNTD2Q8IXW0 634 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 ANKRD42Q8N9B4 389 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 XPO6Q96QU8 1125 aaKnown RBP9.79□□□□□ -0.84
TOP1-201ENST00000361337 ACTR5Q9H9F9 607 aaPredicted RBP9.79□□□□□ -0.84
TOP1-201ENST00000361337 LUC7LQ9NQ29 371 aaKnown RBP9.79□□□□□ -0.84
TOP1-201ENST00000361337 EMILIN3Q9NT22 766 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 DNM3Q9UQ16 869 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 STXBP5LQ9Y2K9 1186 aa9.79□□□□□ -0.84
TOP1-201ENST00000361337 MYH4Q9Y623 1939 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 GSTTP1A0A1W2PQM5 241 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 ARHGEF35A5YM69 484 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 FOXO6A8MYZ6 492 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 PAEPP09466 180 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 SLCO1A2P46721 670 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 PSMC6P62333 389 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 ATP11AP98196 1134 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 XRCC4Q13426 336 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 RUFY4Q6ZNE9 571 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 MIER3Q7Z3K6 550 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 DPP9Q86TI2 863 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 LONP2Q86WA8 852 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 OLIG1Q8TAK6 271 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 NSMCE1Q8WV22 266 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 ZNF317Q96PQ6 595 aaPredicted RBP9.78□□□□□ -0.84
TOP1-201ENST00000361337 CHORDC1Q9UHD1 332 aaPredicted RBP9.78□□□□□ -0.84
TOP1-201ENST00000361337 AGAP1Q9UPQ3 857 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 GCNT3O95395 438 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 PLA2G4BP0C869 781 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 ABCB4P21439 1286 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 HUNKP57058 714 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 DRP2Q13474 957 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 LLGL1Q15334 1064 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 CCDC38Q502W7 563 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 ERMARDQ5T6L9 678 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 APOBEC3FQ8IUX4 373 aaKnown RBP9.78□□□□□ -0.84
TOP1-201ENST00000361337 U2AF1L4Q8WU68 220 aaKnown RBP9.78□□□□□ -0.84
TOP1-201ENST00000361337 RNF25Q96BH1 459 aaPredicted RBP9.78□□□□□ -0.84
TOP1-201ENST00000361337 TLCD1Q96CP7 247 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 STAMBPL1Q96FJ0 436 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 CHMP6Q96FZ7 201 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 PBKQ96KB5 322 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 BHMT2Q9H2M3 363 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 GPRC5DQ9NZD1 345 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 PCDHB13Q9Y5F0 798 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 MYH7BA7E2Y1 1941 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 AKAP3O75969 853 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 CYP11B2P19099 503 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 IRX1P78414 480 aaPredicted RBP9.78□□□□□ -0.84
TOP1-201ENST00000361337 LACTB2Q53H82 288 aaPredicted RBP9.78□□□□□ -0.84
TOP1-201ENST00000361337 AGBL2Q5U5Z8 902 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 LRRC34Q8IZ02 419 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 SIX2Q9NPC8 291 aa9.78□□□□□ -0.84
TOP1-201ENST00000361337 SRRM3A6NNA2 597 aaPredicted RBP9.77□□□□□ -0.85
TOP1-201ENST00000361337 MGRN1O60291 552 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 EVI5O60447 810 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 GFPT2O94808 682 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 ATP6V1G2O95670 118 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 PGK2P07205 417 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 MMEP08473 750 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 PDIA5Q14554 519 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 MFSD4BQ5TF39 518 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 PALB2Q86YC2 1186 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 LNX1Q8TBB1 728 aaPredicted RBP9.77□□□□□ -0.85
TOP1-201ENST00000361337 ATXN2LQ8WWM7 1075 aaKnown RBP9.77□□□□□ -0.85
TOP1-201ENST00000361337 CEP63Q96MT8 703 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 TXLNGYQ9BZA5 131 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 NOD2Q9HC29 1040 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 MLXIPLQ9NP71 852 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 NYAP2Q9P242 653 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 SNX24Q9Y343 169 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 ROBO3Q96MS0 1386 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 CLIC2O15247 247 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 MED24O75448 989 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 GALCP54803 685 aa9.77□□□□□ -0.85
TOP1-201ENST00000361337 PLTPP55058 493 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms