RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 NUDCD3Q8IVD9 361 aa14.84□□□□□ -0.03
SMC5-201ENST00000361138 ATP6V0A1Q93050 837 aa14.84□□□□□ -0.03
SMC5-201ENST00000361138 ZKSCAN4Q969J2 545 aaPredicted RBP14.84□□□□□ -0.03
SMC5-201ENST00000361138 TRPV6Q9H1D0 765 aa14.84□□□□□ -0.03
SMC5-201ENST00000361138 LOC102724428A0A0B4J2F2 783 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 UBTFL6P0CB48 400 aaPredicted RBP14.83□□□□□ -0.03
SMC5-201ENST00000361138 ARSEP51690 589 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 SIK1P57059 783 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 CCDC138Q96M89 665 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 SERPINB12Q96P63 405 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 UPF3AQ9H1J1 476 aaKnown RBP14.83□□□□□ -0.03
SMC5-201ENST00000361138 PABPC3Q9H361 631 aaKnown RBP14.83□□□□□ -0.03
SMC5-201ENST00000361138 ALG13Q9NP73 1137 aaKnown RBP14.83□□□□□ -0.03
SMC5-201ENST00000361138 ZFATQ9P243 1243 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 MYOM1P52179 1685 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 CD58P19256 250 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 PAX7P23759 505 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 TARSP26639 723 aaKnown RBP14.83□□□□□ -0.03
SMC5-201ENST00000361138 SERPINB4P48594 390 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 PDXDC2PQ6P474 469 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 SUPT20HQ8NEM7 779 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 AGXT2Q9BYV1 514 aa14.83□□□□□ -0.03
SMC5-201ENST00000361138 DHX36Q9H2U1 1008 aaKnown RBP14.83□□□□□ -0.03
SMC5-201ENST00000361138 TMEM253P0C7T8 217 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 POLD1P28340 1107 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 SLC1A1P43005 524 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 ALDH18A1P54886 795 aaKnown RBP14.83□□□□□ -0.04
SMC5-201ENST00000361138 MED21Q13503 144 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 DNAL1Q4LDG9 190 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 FIGNQ5HY92 759 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 RARS2Q5T160 578 aaKnown RBP14.83□□□□□ -0.04
SMC5-201ENST00000361138 GOLPH3Q9H4A6 298 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 TRIM33Q9UPN9 1127 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 CLDN3O15551 220 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 CAND2O75155 1236 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 TRIM49P0CI25 452 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 TRIM49CP0CI26 452 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 MDH1BQ5I0G3 518 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 BZW1Q7L1Q6 419 aaKnown RBP14.83□□□□□ -0.04
SMC5-201ENST00000361138 FAM20AQ96MK3 541 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 APEX2Q9UBZ4 518 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 MAGEA13PA6NCF6 341 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 UBE2Q2LH0YL09 131 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 ASAP2O43150 1006 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 SH3BP5O60239 455 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 PEX3P56589 373 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 P3H1Q32P28 736 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 EPS8L3Q8TE67 593 aaKnown RBP14.83□□□□□ -0.04
SMC5-201ENST00000361138 DCAF4Q8WV16 495 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 PIGBQ92521 554 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 CEP170P1Q96L14 293 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 PTPRUQ92729 1446 aa14.83□□□□□ -0.04
SMC5-201ENST00000361138 O00370 1275 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 APBA3O96018 575 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
SMC5-201ENST00000361138 ACADSP16219 412 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 SPOPLQ6IQ16 392 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 SESTD1Q86VW0 696 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 ACTRT1Q8TDG2 376 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 CYP4F11Q9HBI6 524 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 STK32BQ9NY57 414 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 PDP2Q9P2J9 529 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 KDSRQ06136 332 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 RANBP17Q9H2T7 1088 aaKnown RBP14.82□□□□□ -0.04
SMC5-201ENST00000361138 QTRT2Q9H974 415 aaKnown RBP14.82□□□□□ -0.04
SMC5-201ENST00000361138 SEL1LQ9UBV2 794 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 USP17L15C9J2P7 530 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 USP17L13C9JLJ4 530 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 USP17L11C9JVI0 530 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 USP17L18D6R9N7 530 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 USP17L22D6RA61 530 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 USP17L17D6RBQ6 530 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 USP17L19D6RCP7 530 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 USP17L20D6RJB6 530 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 PRDX5P30044 214 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 GABPAQ06546 454 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 USP17L24Q0WX57 530 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 MEI1Q5TIA1 1274 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 USP17L6PQ6QN14 398 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 ANKMY2Q8IV38 441 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 RIBC1Q8N443 379 aaPredicted RBP14.82□□□□□ -0.04
SMC5-201ENST00000361138 CEP95Q96GE4 821 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 C11orf70Q9BRQ4 267 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 GDF3Q9NR23 364 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 PSMC3IPQ9P2W1 217 aaPredicted RBP14.82□□□□□ -0.04
SMC5-201ENST00000361138 ZNF233A6NK53 670 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 DOK7Q18PE1 504 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 KIAA0825Q8IV33 1275 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 PPM1NQ8N819 430 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 MARCH10Q8NA82 808 aaPredicted RBP14.82□□□□□ -0.04
SMC5-201ENST00000361138 CATSPER1Q8NEC5 780 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 MAGEB18Q96M61 343 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 DDX56Q9NY93 547 aaKnown RBP14.82□□□□□ -0.04
SMC5-201ENST00000361138 SHPRHQ149N8 1683 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 KPNA2P52292 529 aaKnown RBP14.82□□□□□ -0.04
SMC5-201ENST00000361138 TTMPQ5BVD1 217 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 C4orf33Q8N1A6 199 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 GLG1Q92896 1179 aa14.82□□□□□ -0.04
SMC5-201ENST00000361138 RBM15Q96T37 977 aaKnown RBP eCLIP14.82□□□□□ -0.04
SMC5-201ENST00000361138 MTO1Q9Y2Z2 717 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms