RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 MAFO75444 373 aaPredicted RBP14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 CYBAP13498 195 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 SCP2P22307 547 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 GTF2BQ00403 316 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 MAP9Q49MG5 647 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 HSP90B2PQ58FF3 399 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 FIGNQ5HY92 759 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 ZC3H3Q8IXZ2 948 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 TMEM161BQ8NDZ6 487 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 PPP1R13LQ8WUF5 828 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 JAKMIP2Q96AA8 810 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 EIF3CQ99613 913 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 NTPCRQ9BSD7 190 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 ADAM21Q9UKJ8 722 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 A0A1W2PQJ5 194 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 A6NJR5 290 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 CLIC2O15247 247 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 ELNP15502 786 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 GLRA2P23416 452 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 ARL2P36404 184 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 CDK17Q00537 523 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 NFIL3Q16649 462 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 DGKDQ16760 1214 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 PAPD7Q5XG87 772 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 WDR59Q6PJI9 974 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 TCP11Q8WWU5 503 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 TSGA10Q9BZW7 698 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 SIP14410 1827 aa14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 H3BRB1 525 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 GPR25O00155 361 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 EPB41P11171 864 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 HNRNPH2P55795 449 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 SNRPFP62306 86 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 VSNL1P62760 191 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 BRDTQ58F21 947 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 LRRC71Q8N4P6 559 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 TUT1Q9H6E5 874 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 PDE11AQ9HCR9 933 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 IGKV6-21A0A0C4DH24 114 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 ANO9A1A5B4 782 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 DENND3A2RUS2 1198 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 INSRRP14616 1297 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 MARSP56192 900 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 BEX3Q00994 111 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 CASP8Q14790 479 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 VWA3BQ502W6 1294 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 ZNF484Q5JVG2 852 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 IQCEQ6IPM2 695 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 TAS1R3Q7RTX0 852 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 ERGIC2Q96RQ1 377 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 TTYH3Q9C0H2 523 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 NHEJ1Q9H9Q4 299 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 METTL14Q9HCE5 456 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 CWC15Q9P013 229 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 FAM184BQ9ULE4 1060 aa14.31□□□□□ -0.12
SQSTM1-201ENST00000360718 MYADML2A6NDP7 307 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 SLC16A3O15427 465 aaKnown RBP14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 GJB1P08034 283 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 NAMPTP43490 491 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 IGBP1P78318 339 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 CACNB2Q08289 660 aaPredicted RBP14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 SPA17Q15506 151 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 MIIPQ5JXC2 388 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 IER5Q5VY09 327 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 MFSD14CQ5VZR4 134 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 FRMD5Q7Z6J6 570 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 DEPTORQ8TB45 409 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 KAT2BQ92831 832 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 AP5M1Q9H0R1 490 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 NDST4Q9H3R1 872 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 SUGCTQ9HAC7 445 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 AGPAT3Q9NRZ7 376 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 ARMCX3Q9UH62 379 aaPredicted RBP14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 TSKSQ9UJT2 592 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 TBX20Q9UMR3 447 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 FRMD4BQ9Y2L6 1034 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 TARSL2A2RTX5 802 aaKnown RBP14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 H3BQF6 201 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 PSMC2P35998 433 aaKnown RBP14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 CASP4P49662 377 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 KIF5AQ12840 1032 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 MYBPC2Q14324 1141 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 VIPAS39Q9H9C1 493 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 MED4Q9NPJ6 270 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 SRRDQ9UH36 339 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 USP20Q9Y2K6 914 aa14.3□□□□□ -0.12
SQSTM1-201ENST00000360718 LRRIQ4A6NIV6 560 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 C22orf31O95567 290 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 COL1A2P08123 1366 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 AKR1A1P14550 325 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 STRN3Q13033 797 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 CAPSQ13938 189 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 MXD4Q14582 209 aaPredicted RBP14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 CCDC70Q6NSX1 233 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 SLC9A9Q8IVB4 645 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 NOA1Q8NC60 698 aaKnown RBP14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 FAM71BQ8TC56 605 aa14.29□□□□□ -0.12
SQSTM1-201ENST00000360718 ZNF296Q8WUU4 475 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms