RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 SYNGAP1Q96PV0 1343 aa22.34■■□□□ 1.17
TRIM3-202ENST00000359518 CYP3A4P08684 503 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 CREB1P16220 341 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 SLC15A2Q16348 729 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 LONRF1Q17RB8 773 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 SEL1L2Q5TEA6 688 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 STXBP4Q6ZWJ1 553 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 SLC47A2Q86VL8 602 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 SGSM3Q96HU1 749 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 DDX23Q9BUQ8 820 aaKnown RBP22.33■■□□□ 1.17
TRIM3-202ENST00000359518 MTRF1LQ9UGC7 380 aaKnown RBP22.33■■□□□ 1.17
TRIM3-202ENST00000359518 KIF13BQ9NQT8 1826 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 MMP13P45452 471 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 MMP14P50281 582 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 PPP2R5AQ15172 486 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 TRIP13Q15645 432 aaPredicted RBP22.33■■□□□ 1.17
TRIM3-202ENST00000359518 C1orf54Q8WWF1 131 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 ZNF622Q969S3 477 aaKnown RBP eCLIP22.33■■□□□ 1.17
TRIM3-202ENST00000359518 TRPC6Q9Y210 931 aa22.33■■□□□ 1.17
TRIM3-202ENST00000359518 CCT8L1PA6NM43 557 aa22.33■■□□□ 1.16
TRIM3-202ENST00000359518 CHRNA3P32297 505 aa22.33■■□□□ 1.16
TRIM3-202ENST00000359518 VAMP7P51809 220 aa22.33■■□□□ 1.16
TRIM3-202ENST00000359518 STAT2P52630 851 aa22.33■■□□□ 1.16
TRIM3-202ENST00000359518 CEP55Q53EZ4 464 aa22.33■■□□□ 1.16
TRIM3-202ENST00000359518 NOP9Q86U38 636 aaKnown RBP22.33■■□□□ 1.16
TRIM3-202ENST00000359518 CCDC127Q96BQ5 260 aa22.33■■□□□ 1.16
TRIM3-202ENST00000359518 TBC1D31Q96DN5 1066 aa22.33■■□□□ 1.16
TRIM3-202ENST00000359518 FAM84AQ96KN4 292 aa22.33■■□□□ 1.16
TRIM3-202ENST00000359518 RASGRF2O14827 1237 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 POLR2MP0CAP2 368 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 RARAP10276 462 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 ADCY1Q08828 1119 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 PADI6Q6TGC4 694 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 GMCL1P1Q8NEA9 526 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 TAF1LQ8IZX4 1826 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 DLATP10515 647 aaKnown RBP22.32■■□□□ 1.16
TRIM3-202ENST00000359518 MAP2K1Q02750 393 aaPredicted RBP22.32■■□□□ 1.16
TRIM3-202ENST00000359518 PPP2R5EQ16537 467 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 MSL1Q68DK7 614 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 PLEKHO2Q8TD55 490 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 TCP11Q8WWU5 503 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 SLC5A5Q92911 643 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 PGM2Q96G03 612 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 CSRNP1Q96S65 589 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 GEMIN8Q9NWZ8 242 aaKnown RBP22.32■■□□□ 1.16
TRIM3-202ENST00000359518 BAIAP2L1Q9UHR4 511 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 ATP8B3O60423 1300 aa22.32■■□□□ 1.16
TRIM3-202ENST00000359518 VPS41P49754 854 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 PEX5P50542 639 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 ZNF131P52739 623 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 PPP2R5CQ13362 524 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 ARMC9Q7Z3E5 817 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 PNMA8AQ86V59 439 aaPredicted RBP22.31■■□□□ 1.16
TRIM3-202ENST00000359518 NUP85Q9BW27 656 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 RIPK2O43353 540 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 ANKS4BQ8N8V4 417 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 DYDC1Q8WWB3 177 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 IPO5O00410 1097 aaKnown RBP22.31■■□□□ 1.16
TRIM3-202ENST00000359518 CLDN3O15551 220 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 EPC2Q52LR7 807 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 TBC1D1Q86TI0 1168 aaPredicted RBP22.31■■□□□ 1.16
TRIM3-202ENST00000359518 TMX4Q9H1E5 349 aaPredicted RBP22.31■■□□□ 1.16
TRIM3-202ENST00000359518 CXorf56Q9H5V9 222 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 FBXO28Q9NVF7 368 aa22.31■■□□□ 1.16
TRIM3-202ENST00000359518 CLTAP09496 248 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 CHRNB2P17787 502 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 COILP38432 576 aaPredicted RBP22.3■■□□□ 1.16
TRIM3-202ENST00000359518 GSCP56915 257 aaPredicted RBP22.3■■□□□ 1.16
TRIM3-202ENST00000359518 CETN1Q12798 172 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 C6orf118Q5T5N4 469 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 SAMD15Q9P1V8 674 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 SEL1LQ9UBV2 794 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 MIF4GDA9UHW6 222 aaKnown RBP22.3■■□□□ 1.16
TRIM3-202ENST00000359518 AUHQ13825 339 aaKnown RBP22.3■■□□□ 1.16
TRIM3-202ENST00000359518 SLC13A5Q86YT5 568 aaPredicted RBP22.3■■□□□ 1.16
TRIM3-202ENST00000359518 ANKRD42Q8N9B4 389 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 ZNF564Q8TBZ8 553 aaPredicted RBP22.3■■□□□ 1.16
TRIM3-202ENST00000359518 ATG4AQ8WYN0 398 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 ZNF653Q96CK0 615 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 PWWP2AQ96N64 755 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 GPRC5CQ9NQ84 441 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 ABCF3Q9NUQ8 709 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 CTNNAL1Q9UBT7 734 aa22.3■■□□□ 1.16
TRIM3-202ENST00000359518 CTNNA2P26232 953 aa22.29■■□□□ 1.16
TRIM3-202ENST00000359518 C2CD6Q53TS8 623 aa22.29■■□□□ 1.16
TRIM3-202ENST00000359518 EPS8L1Q8TE68 723 aa22.29■■□□□ 1.16
TRIM3-202ENST00000359518 PCDHA3Q9Y5H8 950 aa22.29■■□□□ 1.16
TRIM3-202ENST00000359518 GREB1LQ9C091 1923 aaPredicted RBP22.29■■□□□ 1.16
TRIM3-202ENST00000359518 DRG2P55039 364 aaKnown RBP22.29■■□□□ 1.16
TRIM3-202ENST00000359518 NFIL3Q16649 462 aa22.29■■□□□ 1.16
TRIM3-202ENST00000359518 LACTB2Q53H82 288 aaPredicted RBP22.29■■□□□ 1.16
TRIM3-202ENST00000359518 C1orf220Q5T0J3 134 aa22.29■■□□□ 1.16
TRIM3-202ENST00000359518 FAM118BQ9BPY3 351 aa22.29■■□□□ 1.16
TRIM3-202ENST00000359518 PCYOX1Q9UHG3 505 aa22.29■■□□□ 1.16
TRIM3-202ENST00000359518 PIK3CDO00329 1044 aa22.28■■□□□ 1.16
TRIM3-202ENST00000359518 PODXLO00592 558 aa22.28■■□□□ 1.16
TRIM3-202ENST00000359518 RTN2O75298 545 aa22.28■■□□□ 1.16
TRIM3-202ENST00000359518 ADCY2Q08462 1091 aa22.28■■□□□ 1.16
TRIM3-202ENST00000359518 DAB2IPQ5VWQ8 1189 aa22.28■■□□□ 1.16
TRIM3-202ENST00000359518 C11orf63Q6NUN7 778 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms