RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 RASGRF1Q13972 1273 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 SIX6OS1Q8N1H7 587 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 PRPF18Q99633 342 aaKnown RBP9.28□□□□□ -0.92
COL6A6-201ENST00000358511 ASPSCR1Q9BZE9 553 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 RXFP1Q9HBX9 757 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 DNAJC12Q9UKB3 198 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 DYTNA2CJ06 578 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 RAD51CO43502 376 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 PDE8BO95263 885 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 ATP2B4P23634 1241 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 TSGA10IPQ3SY00 556 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 NSMFQ6X4W1 530 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 RSRC2Q7L4I2 434 aaKnown RBP9.28□□□□□ -0.92
COL6A6-201ENST00000358511 METTL13Q8N6R0 699 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 MIEF2Q96C03 454 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 MTRQ99707 1265 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 AMNQ9BXJ7 453 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 WDR11Q9BZH6 1224 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 L1RE1Q9UN81 338 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 TESPA1A2RU30 521 aaPredicted RBP9.28□□□□□ -0.92
COL6A6-201ENST00000358511 CASP1P29466 404 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 HACE1Q8IYU2 909 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 TTC30BQ8N4P2 665 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 SUPT20HQ8NEM7 779 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 CNBD2Q96M20 576 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 POLD4Q9HCU8 107 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 FAM8A1Q9UBU6 413 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 NRKQ7Z2Y5 1582 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 CLPTM1O96005 669 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 KRT7P08729 469 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 MFSD14BQ5SR56 506 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 ZNF483Q8TF39 744 aaPredicted RBP9.28□□□□□ -0.92
COL6A6-201ENST00000358511 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL6A6-201ENST00000358511 KLHL4Q9C0H6 718 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 GINS2Q9Y248 185 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 BCAMP50895 628 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 NAALADL2Q58DX5 795 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 PPM1NQ8N819 430 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 ATP6V0A1Q93050 837 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 COG4Q9H9E3 785 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 DDX20Q9UHI6 824 aaKnown RBP9.28□□□□□ -0.92
COL6A6-201ENST00000358511 H3BQF6 201 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 OATP04181 439 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 MYLK4Q86YV6 388 aaPredicted RBP9.27□□□□□ -0.92
COL6A6-201ENST00000358511 RBBP8NLQ8NC74 664 aaPredicted RBP9.27□□□□□ -0.92
COL6A6-201ENST00000358511 ZFRQ96KR1 1074 aaKnown RBP9.27□□□□□ -0.92
COL6A6-201ENST00000358511 ADAM22Q9P0K1 906 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 CITO14578 2027 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 ABCA6Q8N139 1617 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 A0A1W2PQJ5 194 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 WBP4O75554 376 aaKnown RBP9.27□□□□□ -0.92
COL6A6-201ENST00000358511 ARSEP51690 589 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 SFR1Q86XK3 245 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 USP38Q8NB14 1042 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 ATL2Q8NHH9 583 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 HSPH1Q92598 858 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 MAGEB18Q96M61 343 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 RBM15Q96T37 977 aaKnown RBP eCLIP9.27□□□□□ -0.92
COL6A6-201ENST00000358511 PUS7LQ9H0K6 701 aaKnown RBP9.27□□□□□ -0.92
COL6A6-201ENST00000358511 MROH7-TTC4A0A0A0MT08 1334 aa9.27□□□□□ -0.92
COL6A6-201ENST00000358511 SOX5P35711 763 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 GUF1Q8N442 669 aaKnown RBP9.27□□□□□ -0.93
COL6A6-201ENST00000358511 SCG3Q8WXD2 468 aaKnown RBP9.27□□□□□ -0.93
COL6A6-201ENST00000358511 RPS6KC1Q96S38 1066 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 ADPGKQ9BRR6 497 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 ZNF577Q9BSK1 485 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 BTBD7Q9P203 1132 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 CACNB1Q02641 598 aaPredicted RBP9.27□□□□□ -0.93
COL6A6-201ENST00000358511 TCIRG1Q13488 830 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 DPP8Q6V1X1 898 aaPredicted RBP9.27□□□□□ -0.93
COL6A6-201ENST00000358511 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.27□□□□□ -0.93
COL6A6-201ENST00000358511 OSBP2Q969R2 916 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 SERPINB12Q96P63 405 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 COQ7Q99807 217 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 ZWILCHQ9H900 591 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 KMT5AQ9NQR1 393 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 DDX56Q9NY93 547 aaKnown RBP9.27□□□□□ -0.93
COL6A6-201ENST00000358511 ABCA8O94911 1581 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 PXDNLA1KZ92 1463 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 AKAP10O43572 662 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 HEMGNQ9BXL5 484 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 DIABLOQ9NR28 239 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 SYNJ2BP-COX16A0A087WUM0 186 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 SPDYE2BA6NHP3 402 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 SPDYE6P0CI01 402 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 ITIH2P19823 946 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 PRAMEP78395 509 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 COASYQ13057 564 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 CCDC85BQ15834 202 aaPredicted RBP9.27□□□□□ -0.93
COL6A6-201ENST00000358511 RHOT1Q8IXI2 618 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 IL17REQ8NFR9 667 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 SYBUQ9NX95 663 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 COX16Q9P0S2 106 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 TRIM10Q9UDY6 481 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 DBR1Q9UK59 544 aaKnown RBP9.27□□□□□ -0.93
COL6A6-201ENST00000358511 PHKA1P46020 1223 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 NUP107P57740 925 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 SFSWAPQ12872 951 aaKnown RBP9.27□□□□□ -0.93
COL6A6-201ENST00000358511 CPXCR1Q8N123 301 aa9.27□□□□□ -0.93
COL6A6-201ENST00000358511 XPO1O14980 1071 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms