RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ADPGKQ9BRR6 497 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 GBP3Q9H0R5 595 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 CHST12Q9NRB3 414 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 PTPRSQ13332 1948 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 SYCE3A1L190 88 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 PSMA7O14818 248 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 PIGRP01833 764 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 PPP1R2P41236 205 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 NLRP12P59046 1061 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 ZNF568Q3ZCX4 644 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 COBLL1Q53SF7 1204 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 HS2ST1Q7LGA3 356 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 CCDC51Q96ER9 411 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 ADAM2Q99965 735 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 TCHPQ9BT92 498 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 TRIM6Q9C030 488 aaPredicted RBP16.7■□□□□ 0.26
TPM1-206ENST00000358278 IKZF4Q9H2S9 585 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 TMX1Q9H3N1 280 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 PDZD7Q9H5P4 517 aa16.7■□□□□ 0.26
TPM1-206ENST00000358278 ANK1P16157 1881 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 RALGAPA2Q2PPJ7 1873 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 A0A1B0GUA9 196 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 TOM1L1O75674 476 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 ACTN1P12814 892 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 HOXD13P35453 343 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 IKBKEQ14164 716 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 STX1AQ16623 288 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 DPCR1Q3MIW9 517 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 KLHL10Q6JEL2 608 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 SLC27A1Q6PCB7 646 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 MPZL3Q6UWV2 235 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 APBB1IPQ7Z5R6 666 aaPredicted RBP16.69■□□□□ 0.26
TPM1-206ENST00000358278 ADSSL1Q8N142 457 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 MLKLQ8NB16 471 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 DACH1Q9UI36 760 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 TNFSF13BQ9Y275 285 aa16.69■□□□□ 0.26
TPM1-206ENST00000358278 TDRD15B5MCY1 1934 aaKnown RBP16.69■□□□□ 0.26
TPM1-206ENST00000358278 TISP43B9A030 160 aa16.68■□□□□ 0.26
TPM1-206ENST00000358278 CLDN3O15551 220 aa16.68■□□□□ 0.26
TPM1-206ENST00000358278 MGEA5O60502 916 aa16.68■□□□□ 0.26
TPM1-206ENST00000358278 HARSP12081 509 aaKnown RBP16.68■□□□□ 0.26
TPM1-206ENST00000358278 MLLT1Q03111 559 aaPredicted RBP16.68■□□□□ 0.26
TPM1-206ENST00000358278 PSRC1Q6PGN9 363 aaPredicted RBP16.68■□□□□ 0.26
TPM1-206ENST00000358278 FAM43BQ6ZT52 329 aaPredicted RBP16.68■□□□□ 0.26
TPM1-206ENST00000358278 ZBTB33Q86T24 672 aa16.68■□□□□ 0.26
TPM1-206ENST00000358278 VWCEQ96DN2 955 aa16.68■□□□□ 0.26
TPM1-206ENST00000358278 GZF1Q9H116 711 aaPredicted RBP16.68■□□□□ 0.26
TPM1-206ENST00000358278 TYW1Q9NV66 732 aaKnown RBP16.68■□□□□ 0.26
TPM1-206ENST00000358278 ANO10Q9NW15 660 aa16.68■□□□□ 0.26
TPM1-206ENST00000358278 PDCD11Q14690 1871 aaKnown RBP16.68■□□□□ 0.26
TPM1-206ENST00000358278 ANKRD63C9JTQ0 380 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 CCDC192P0DO97 292 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 CD44P16070 742 aaKnown RBP16.67■□□□□ 0.26
TPM1-206ENST00000358278 IBSPP21815 317 aaPredicted RBP16.67■□□□□ 0.26
TPM1-206ENST00000358278 MAGEA10P43363 369 aaPredicted RBP16.67■□□□□ 0.26
TPM1-206ENST00000358278 NOLC1Q14978 699 aaKnown RBP eCLIP16.67■□□□□ 0.26
TPM1-206ENST00000358278 TCTN1Q2MV58 587 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 DCAF4L1Q3SXM0 396 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 EEF1DP3Q658K8 133 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 SLFN12LQ6IEE8 588 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 ARMCX5Q6P1M9 558 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 SLC39A4Q6P5W5 647 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 GOLGA5Q8TBA6 731 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 POMGNT1Q8WZA1 660 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 ZBTB45Q96K62 511 aaPredicted RBP16.67■□□□□ 0.26
TPM1-206ENST00000358278 TSPYL2Q9H2G4 693 aaPredicted RBP16.67■□□□□ 0.26
TPM1-206ENST00000358278 KCTD10Q9H3F6 313 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 CTNND2Q9UQB3 1225 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 PPP1R3GB7ZBB8 358 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 H0YGN5 161 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 NPTXRO95502 500 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 FGBP02675 491 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 TYRO3Q06418 890 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 PAK1Q13153 545 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 DSC3Q14574 896 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 ZNF365Q70YC5 407 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 OTOP2Q7RTS6 562 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 DHTKD1Q96HY7 919 aaPredicted RBP16.67■□□□□ 0.26
TPM1-206ENST00000358278 TSG101Q99816 390 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 MSTO1Q9BUK6 570 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 EIF2AQ9BY44 585 aaKnown RBP16.67■□□□□ 0.26
TPM1-206ENST00000358278 CDT1Q9H211 546 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 RGS18Q9NS28 235 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 C1orf112Q9NSG2 853 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 FAM105AQ9NUU6 356 aa16.67■□□□□ 0.26
TPM1-206ENST00000358278 CGNQ9P2M7 1197 aaKnown RBP16.67■□□□□ 0.26
TPM1-206ENST00000358278 FNDC1Q4ZHG4 1894 aaPredicted RBP16.66■□□□□ 0.26
TPM1-206ENST00000358278 ABHD14A-ACY1A0A1B0GW23 586 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 PDXKO00764 312 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 TGFB1I1O43294 461 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 CALUO43852 315 aaPredicted RBP16.66■□□□□ 0.26
TPM1-206ENST00000358278 EFCAB14O75071 495 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 BAIAP3O94812 1187 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 PROZP22891 400 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 RAB27AP51159 221 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 EPHB4P54760 987 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 SNRPFP62306 86 aaKnown RBP16.66■□□□□ 0.26
TPM1-206ENST00000358278 SLC24A5Q71RS6 500 aa16.66■□□□□ 0.26
TPM1-206ENST00000358278 NELFBQ8WX92 580 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms