RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 TMOD4Q9NZQ9 345 aa10.7□□□□□ -0.7
RNF40-202ENST00000357890 PI4KBQ9UBF8 816 aa10.7□□□□□ -0.7
RNF40-202ENST00000357890 ARL2BPQ9Y2Y0 163 aa10.7□□□□□ -0.7
RNF40-202ENST00000357890 SLC4A7Q9Y6M7 1214 aa10.7□□□□□ -0.7
RNF40-202ENST00000357890 DDX60Q8IY21 1712 aaKnown RBP10.7□□□□□ -0.7
RNF40-202ENST00000357890 EEF2P13639 858 aaKnown RBP10.69□□□□□ -0.7
RNF40-202ENST00000357890 LMNB1P20700 586 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 BAG6P46379 1132 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 GALCP54803 685 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 ECM1Q16610 540 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 EDRF1Q3B7T1 1238 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 DCAF4Q8WV16 495 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 LRRC37BQ96QE4 947 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 CHCHD3Q9NX63 227 aaKnown RBP10.69□□□□□ -0.7
RNF40-202ENST00000357890 DNAJC12Q9UKB3 198 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 ECM29Q5VYK3 1845 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 MYH14Q7Z406 1995 aaKnown RBP10.69□□□□□ -0.7
RNF40-202ENST00000357890 TMEM120BA0PK00 339 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 ARHGEF35A5YM69 484 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 MGRN1O60291 552 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 GDF11O95390 407 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 BCRP11274 1271 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 RBM26Q5T8P6 1007 aaKnown RBP10.69□□□□□ -0.7
RNF40-202ENST00000357890 HGSNATQ68CP4 663 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 CCDC62Q6P9F0 684 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 GAS7O60861 476 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 SPAG7O75391 227 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 MED24O75448 989 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 TRIM49P0CI25 452 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 TRIM49CP0CI26 452 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 GHRP10912 638 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 CASP4P49662 377 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 PDE1CQ14123 709 aaPredicted RBP10.69□□□□□ -0.7
RNF40-202ENST00000357890 DRAP1Q14919 205 aaPredicted RBP10.69□□□□□ -0.7
RNF40-202ENST00000357890 LRRC36Q1X8D7 754 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 HP1BP3Q5SSJ5 553 aaPredicted RBP10.69□□□□□ -0.7
RNF40-202ENST00000357890 CROCCP2Q86T23 111 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 TAB3Q8N5C8 712 aaPredicted RBP10.69□□□□□ -0.7
RNF40-202ENST00000357890 PCIF1Q9H4Z3 704 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 STOML1Q9UBI4 398 aa10.69□□□□□ -0.7
RNF40-202ENST00000357890 CORO1CQ9ULV4 474 aaPredicted RBP10.69□□□□□ -0.7
RNF40-202ENST00000357890 MYH13Q9UKX3 1938 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 ATXN2Q99700 1313 aaKnown RBP10.68□□□□□ -0.7
RNF40-202ENST00000357890 RSPH10B2B2RC85 870 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 F8VZ95 297 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 NVLO15381 856 aaKnown RBP10.68□□□□□ -0.7
RNF40-202ENST00000357890 MAP3K7O43318 606 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 RSPH10BP0C881 870 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 ABCB5Q2M3G0 1257 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 RNF220Q5VTB9 566 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 OLFML2BQ68BL8 750 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 PHLDB3Q6NSJ2 640 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 CDC42EP5Q6NZY7 148 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 CCDC174Q6PII3 467 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 CATSPER3Q86XQ3 398 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 CEP70Q8NHQ1 597 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 HAS1Q92839 578 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 DNAJC19Q96DA6 116 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 ZNF570Q96NI8 536 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 MXD3Q9BW11 206 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 PITPNM2Q9BZ72 1349 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 HNRNPCP07910 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
RNF40-202ENST00000357890 GYS1P13807 737 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 PSMC6P62333 389 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 IL9RQ01113 521 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 FRMD5Q7Z6J6 570 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 FAM20AQ96MK3 541 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 TTC1Q99614 292 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 PLVAPQ9BX97 442 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.68□□□□□ -0.72e-7■□□□□ 10.8
RNF40-202ENST00000357890 SLC26A4O43511 780 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 CIB2O75838 187 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 AKAP3O75969 853 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 PON1P27169 355 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 NMT1P30419 496 aaKnown RBP10.68□□□□□ -0.7
RNF40-202ENST00000357890 ADCY8P40145 1251 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 CRKP46108 304 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 PLCB3Q01970 1234 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 ZNF746Q6NUN9 644 aaPredicted RBP10.68□□□□□ -0.7
RNF40-202ENST00000357890 PPM1KQ8N3J5 372 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 HIPK4Q8NE63 616 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 TPCN2Q8NHX9 752 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 VPS37BQ9H9H4 285 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 DBNDD1Q9H9R9 158 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 OSGEPQ9NPF4 335 aa10.68□□□□□ -0.7
RNF40-202ENST00000357890 DDX4Q9NQI0 724 aaKnown RBP10.68□□□□□ -0.7
RNF40-202ENST00000357890 CHORDC1Q9UHD1 332 aaPredicted RBP10.68□□□□□ -0.7
RNF40-202ENST00000357890 NRAPQ86VF7 1730 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 A0A0G2JND7 137 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 SPDYE5A6NIY4 337 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 SLURP2P0DP57 97 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 DYNC1I2Q13409 638 aaKnown RBP10.67□□□□□ -0.7
RNF40-202ENST00000357890 FOXR2Q6PJQ5 311 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 SLC35G2Q8TBE7 412 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 FBXO25Q8TCJ0 367 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 EZH1Q92800 747 aaPredicted RBP10.67□□□□□ -0.7
RNF40-202ENST00000357890 CCDC127Q96BQ5 260 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 UBE2TQ9NPD8 197 aaPredicted RBP10.67□□□□□ -0.7
RNF40-202ENST00000357890 TYW1Q9NV66 732 aaKnown RBP10.67□□□□□ -0.7
RNF40-202ENST00000357890 ZNF711Q9Y462 761 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms