RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PIK3CAP42336 1068 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 RAP1GAPP47736 663 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 USP11P51784 963 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 SLC18A3Q16572 532 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 A0A0G2JND7 137 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 TLR3O15455 904 aaKnown RBP6.96□□□□□ -1.3
VPS13B-202ENST00000357162 PLS3P13797 630 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 ABCB4P21439 1286 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 SFNP31947 248 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 PRMT9Q6P2P2 845 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 CDKL3Q8IVW4 592 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-202ENST00000357162 BRD8Q9H0E9 1235 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 ROS1P08922 2347 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 CLTCL1P53675 1640 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 CADP27708 2225 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 SKAP1Q86WV1 359 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 NCAPG2Q86XI2 1143 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 NDUFAF2Q8N183 169 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 EME1Q96AY2 570 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 TRABDQ9H4I3 376 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 UTP6Q9NYH9 597 aaKnown RBP6.96□□□□□ -1.3
VPS13B-202ENST00000357162 ADAMTS1Q9UHI8 967 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 NRBP1Q9UHY1 535 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 SUGT1Q9Y2Z0 365 aa6.96□□□□□ -1.3
VPS13B-202ENST00000357162 CYP21A2P08686 494 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 FLAD1Q8NFF5 587 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 XPO6Q96QU8 1125 aaKnown RBP6.95□□□□□ -1.3
VPS13B-202ENST00000357162 ANLNQ9NQW6 1124 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 VPS54Q9P1Q0 977 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 DISP1Q96F81 1524 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 A0A0A6YYK5 440 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-202ENST00000357162 WDR64B1ANS9 1081 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 SMYD5Q6GMV2 418 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 TOGARAM2Q6ZUX3 1019 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 NRBP2Q9NSY0 501 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 LEMD3Q9Y2U8 911 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 TBX3O15119 743 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 ATP6V1E1P36543 226 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 RAB14P61106 215 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 XXYLT1Q8NBI6 393 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 STAP1Q9ULZ2 295 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 TSC22D4Q9Y3Q8 395 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 PALMO75781 387 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 PDE8BO95263 885 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 TIMM50Q3ZCQ8 353 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 NLRP10Q86W26 655 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 DCAF4Q8WV16 495 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 TSSK1BQ9BXA7 367 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 FTOQ9C0B1 505 aaKnown RBP eCLIP6.95□□□□□ -1.3
VPS13B-202ENST00000357162 GMEB1Q9Y692 573 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 MADDQ8WXG6 1647 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 SAGE2PA6NJ88 616 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 CDC42EP1Q00587 391 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 PLD3Q8IV08 490 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 MRPL1Q9BYD6 325 aaKnown RBP6.95□□□□□ -1.3
VPS13B-202ENST00000357162 STK33Q9BYT3 514 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 KCNQ4P56696 695 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 CYP4F22Q6NT55 531 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 ZNF710Q8N1W2 664 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 PLEKHA5Q9HAU0 1116 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 IGF2BP3O00425 579 aaKnown RBP eCLIP6.95□□□□□ -1.3
VPS13B-202ENST00000357162 HNRNPH1P31943 449 aaKnown RBP6.95□□□□□ -1.3
VPS13B-202ENST00000357162 NAB1Q13506 487 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 NR1I3Q14994 352 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 NAB2Q15742 525 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 TPH2Q8IWU9 490 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 DYDC2Q96IM9 177 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 QKIQ96PU8 341 aaKnown RBP eCLIP6.95□□□□□ -1.34e-7■■■■□ 24.9
VPS13B-202ENST00000357162 STOML2Q9UJZ1 356 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 PARP3Q9Y6F1 533 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 H7C0C1 242 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 ATP5OP48047 213 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 RCOR2Q8IZ40 523 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 MYCBPAPQ8TBZ2 947 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 SEC16BQ96JE7 1060 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 MAGEB18Q96M61 343 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 TSPOAP1O95153 1857 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 STX5Q13190 355 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 OLFML2BQ68BL8 750 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 RNF34Q969K3 372 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 PRPF18Q99633 342 aaKnown RBP6.95□□□□□ -1.3
VPS13B-202ENST00000357162 DMAP1Q9NPF5 467 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-202ENST00000357162 COMMD3-BMI1R4GMX3 469 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 BUB1O43683 1085 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 TNFAIP8O95379 198 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 KIAA1755Q5JYT7 1200 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 ZNF555Q8NEP9 628 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 ACTRT1Q8TDG2 376 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 ELAC2Q9BQ52 826 aaKnown RBP6.95□□□□□ -1.3
VPS13B-202ENST00000357162 E2F6O75461 281 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 VSNL1P62760 191 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 KRT28Q7Z3Y7 464 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 CLMNQ96JQ2 1002 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 EMILIN3Q9NT22 766 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 SHOC2Q9UQ13 582 aa6.95□□□□□ -1.3
VPS13B-202ENST00000357162 RAPGEF3O95398 923 aa6.94□□□□□ -1.3
VPS13B-202ENST00000357162 DIXDC1Q155Q3 683 aa6.94□□□□□ -1.3
VPS13B-202ENST00000357162 SUCLG2Q96I99 432 aa6.94□□□□□ -1.3
VPS13B-202ENST00000357162 CCT7Q99832 543 aa6.94□□□□□ -1.3
VPS13B-202ENST00000357162 PTH1RQ03431 593 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms